ncRNA ID | novel_ahy_miR301 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A05:93054059-93054268 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUUUAUUUAUCGUGCAUCAACUU - 24 |
Stem-loop(if miRNA) |
--                -               -----U  A      UG  U       GAG   GAUUAGAUAGUGGGAAGAGAAAUGAAACGAUUAUCUCCCAUG   GUUGAUGCACGAUAAA AAAACACAAAAAGAU      AC GUUUGC  AU GUUAGGA   GUU                                          U   |||||||||||||||| |||||||||||||||      || ||||||  || |||||||   |||   CAACUACGUGCUAUUU UUUUGUGUUUUUCUA      UG CAAACG  UA CAAUCUU   UUU                                          G UU                A               CUCUAU  A      GU  U       --G   UUUUUUAGCUUUGCGAAUAGAGAGUGCAAUAGAGGGUGAUAA |
Stem-loop sequence | GUUGAUGCACGAUAAAAAAACACAAAAAGAUUACAGUUUGCUGAUUGUUAGGAGAGGUUGAUUAGAUAGUGGGAAGAGAAAUGAAACGAUUAUCUCCCAUGUGAAUAGUGGGAGAUAACGUGAGAGAUAAGCGUUUCGAUUUUUUUUUGUUCUAACUAUUGGCAAACAGUUAUCUCAUCUUUUUGUGUUUUAUUUAUCGUGCAUCAACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR557805.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene17657 mRNA sequence | NA | coding protein | psRNATarget |