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BaseInfo

ncRNA ID novel_ahy_miR301
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:93054059-93054268 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - GUUUUAUUUAUCGUGCAUCAACUU - 24
Stem-loop(if miRNA) --                -               -----U  A      UG  U       GAG   GAUUAGAUAGUGGGAAGAGAAAUGAAACGAUUAUCUCCCAUG
  GUUGAUGCACGAUAAA AAAACACAAAAAGAU      AC GUUUGC  AU GUUAGGA   GUU                                          U
  |||||||||||||||| |||||||||||||||      || ||||||  || |||||||   |||
  CAACUACGUGCUAUUU UUUUGUGUUUUUCUA      UG CAAACG  UA CAAUCUU   UUU                                          G
UU                A               CUCUAU  A      GU  U       --G   UUUUUUAGCUUUGCGAAUAGAGAGUGCAAUAGAGGGUGAUAA
Stem-loop sequence GUUGAUGCACGAUAAAAAAACACAAAAAGAUUACAGUUUGCUGAUUGUUAGGAGAGGUUGAUUAGAUAGUGGGAAGAGAAAUGAAACGAUUAUCUCCCAUGUGAAUAGUGGGAGAUAACGUGAGAGAUAAGCGUUUCGAUUUUUUUUUGUUCUAACUAUUGGCAAACAGUUAUCUCAUCUUUUUGUGUUUUAUUUAUCGUGCAUCAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR557805.1
ncRNA:24   UUCAACUACGUGCUAUUUAUUUUG   1
  |||--|||||||||||=||||||*
targets:564   AAG--GAUGCACGAUAGAUAAAAA   585

2.5 TSA: Arachis hypogaea Ahy.Unigene17657 mRNA sequence NA coding protein psRNATarget