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BaseInfo

ncRNA ID ath-miR773b-5p
Species Arabidopsis thaliana
Class miRNA
Genome position chr1:13050667-13050864 [-]
Reference genome TAIR10
Source miRBase
Length 20
Mature sequence(if miRNA) 118 - GGCAAUAACUUGAGCAAACA - 137
Stem-loop(if miRNA)    U     UG        CUCA  UA           G             ACUAU         UAA  U   -      AU    U  AGAAA  C
GGU GAAGG  GCAAUAAC    AA  UAUCAGAGGGU UAGAUACUCAACG     AGGAGGCAA   CU GAG CAAACA  UGAU GC     UC A
||| |||||  ||||||||    ||  ||||||||||| |||||||||||||     |||||||||   || ||| ||||||  |||| ||     ||
UCG UUUCC  CGUUGUUG    UU  AUGGUCUCUCA AUCUGUGAGUUGU     UCCUCUGUU   GA CUU GUUUGU  ACUG CG     AG U
   C     GU        AUAC  GC           A             -CCAU         UUC  C   A      CC    U  AAAUC  C
Stem-loop sequence GGUUGAAGGUGGCAAUAACCUCAAAUAUAUCAGAGGGUGUAGAUACUCAACGACUAUAGGAGGCAAUAACUUGAGCAAACAAUUGAUUGCAGAAAUCCAUCGACUAAAGCUGUCACCUGUUUGAUUCCAGCUUUUGUCUCCUUACCUGUUGAGUGUCUAAACUCUCUGGUACGUUCAUAGUUGUUGCUGCCUUUCGCU

Reference

1 PMID:20407027
"MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana";
Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC;
Plant Cell. 22:1074-1089(2010).