ncRNA ID | novel_ahy_miR285 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A05:6020438-6020616 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR2922380 |
Length | 23 |
Mature sequence(if miRNA) | 157 - CAAAAGGACCUAAUUACAAAAUU - 179 |
Stem-loop(if miRNA) |
--           UUG    GUUA    ----A    A            C              ---UAAAUUAA    ACUCACAAUUAAGA   UUUUGUAAUUA   CUUU    GUAU     AAAA UGUUAGAAUUAA GAAAUAUUUUUCUA           AAGU              A   |||||||||||   ||||    ||||     |||| |||||||||||| ||||||||||||||           ||||   AAAACAUUAAU   GGAA    CAUA     UUUU GCAAUUUUAAUU CUUUAUAAAAAGAU           CUAG              C UU           CCA    --AA    CACAG    C            A              UUCUUUAUAUG    UUUCUAGAUUAAUU |
Stem-loop sequence | UUUUGUAAUUAUUGCUUUGUUAGUAUAAAAAAUGUUAGAAUUAACGAAAUAUUUUUCUAUAAAUUAAAAGUACUCACAAUUAAGAACUUAAUUAGAUCUUUGAUCGUAUAUUUCUUUAGAAAAAUAUUUCAUUAAUUUUAACGCUUUUGACACAUACAAAAGGACCUAAUUACAAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01022228.1 |
|
3.0 | TSA: Arachis hypogaea Unigene22239 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ748655.1 |
|
3.0 | TSA: Arachis hypogaea CL3617Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |