Search result

BaseInfo

ncRNA ID novel_ahy_miR280
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:29119368-29119419 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 23
Mature sequence(if miRNA) 30 - GUAUCUCGUUUACACUGUAAACA - 52
Stem-loop(if miRNA) --             UA A   A AA
  UUUAUGGUGUAAA  A AUA G  U
  |||||||||||||  | ||| |
  AAAUGUCACAUUU  U UAU C  A
AC             GC C   G AC
Stem-loop sequence UUUAUGGUGUAAAUAAAAUAAGAAUACACGUAUCUCGUUUACACUGUAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR578749.1
ncRNA:23   ACAAAUGUCACAUUUGCUCUAUG   1
  **||||||||||||||||||||*
targets:54   CAUUUACAGUGUAAACGAGAUAA   76

1.0 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:23   ACAAAUGUCACAUUUGCUCUAUG   1
  *|||||=||||||||=|||||||
targets:156   CGUUUAUAGUGUAAAUGAGAUAC   178

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
GAER01058827.1
ncRNA:23   ACAAAUGUCACAUUUGCUCUAUG   1
  *|||||||||||||||||*|||*
targets:89   CGUUUACAGUGUAAACGAAAUAA   111

2.5 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget