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BaseInfo

ncRNA ID novel_ahy_miR278
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:3430731-3430871 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - AAUUUUAGUGACUGAUUUUGACGU - 24
Stem-loop(if miRNA) --AC                       C    -------    C     UGU              --GU   UU
    UAAAAUUAGUCAUUAAAAUUAAU AUUA       AUGU GUAUU   AUAUAAAUAUAUAU    AGU  A
    ||||||||||||||||||||||| ||||       |||| |||||   ||||||||||||||    |||  A
    GUUUUAGUCAGUGAUUUUAAUUA UAAU       UAUA UAUAA   UAUAUUUAUAUAUA    UUA  U
UGCA                       A    CAUAUUU    -     UUU              AUUU   UU
Stem-loop sequence ACUAAAAUUAGUCAUUAAAAUUAAUCAUUAAUGUCGUAUUUGUAUAUAAAUAUAUAUGUAGUUUAAUUUAUUUUUAAUAUAUAUUUAUAUUUUAAUAUAUAUUUUAUACUAAUAAUUAAUUUUAGUGACUGAUUUUGACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ755629.1
ncRNA:24   UGCAGUUUUAGUCAGUGAUUUUAA   1
  ||*||||||||||||||||||||*
targets:186   ACAUCAAAAUCAGUCACUAAAAUC   209

1.0 TSA: Arachis hypogaea CL1213Contig4.Arhy mRNA sequence NA coding protein psRNATarget
JR576171.1
ncRNA:24   UGCAGUUUUAGUCAGUGAUUUUAA   1
  *|||*||||||||||||||||||*
targets:110   UCGUAAAAAUCAGUCACUAAAAUC   133

1.0 TSA: Arachis hypogaea Ahy.Unigene39208 mRNA sequence NA coding protein psRNATarget
GAER01050512.1
ncRNA:24   UGCAGUUUUAGUCAGUGAUUUUAA   1
  ||--|||||||||||||||||||*
targets:338   AC--CAAAAUCAGUCACUAAAAUC   359

1.0 TSA: Arachis hypogaea Unigene50550 mRNA sequence NA coding protein psRNATarget
GAER01018153.1
ncRNA:24   UGCAGUUUUAGUCAGUGAUUUUAA   1
  ||**|||||||||*||||||||||
targets:91   ACCCCAAAAUCAGCCACUAAAAUU   114

1.5 TSA: Arachis hypogaea Unigene18161 mRNA sequence NA coding protein psRNATarget
EZ736346.1
ncRNA:24   UGCAGUUUUAGUCAGUGAUUUUAA   1
  |=*|=|||||=|||=|||||||||
targets:1734   AUAUUAAAAUUAGUUACUAAAAUU   1757

2.5 TSA: Arachis hypogaea CL564Contig3.Arhy mRNA sequence NA coding protein psRNATarget