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BaseInfo

ncRNA ID novel_ahy_miR275
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:8018755-8018921 [+]
Reference genome Aradu_v1.0
Source SRR2922380;SRR2922381
Length 21
Mature sequence(if miRNA) 147 - UUGGACUGAAGGGAGCUCCCU - 167
Stem-loop(if miRNA) --A                 CU  U       U        UC      G  G   AC        U  AA        AACAC
   GAGCUUCCUUCAGUCCA  CA GGACGAA AAAGGGAU  GAAUUA CU CUG  UCAUUCAU CA  CGCAAUAG     G
   |||||||||||||||||  || ||||||| ||||||||  |||||| || |||  |||||||| ||  ||||||||     U
   CUCGAGGGAAGUCAGGU  GU UCUGCUU UUUUCCUA  UUUAAU GA GAC  AGUAAGUG GU  GCGUUAUC     G
UCC                 UC  U       -        -C      A  G   GU        U  AA        GUAUA
Stem-loop sequence AGAGCUUCCUUCAGUCCACUCAUGGACGAAUAAAGGGAUUCGAAUUAGCUGCUGACUCAUUCAUUCAAACGCAAUAGAACACGUGAUAUGCUAUUGCGAAUGUGUGAAUGAUGCAGGAGAUAAUUUCAUCCUUUUUUCGUCUUUGCUUGGACUGAAGGGAGCUCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01048873.1
ncRNA:21   UC--CCUCGAGGGAAGUCAGGUU   1
  ||--|||||||||||||||||||
targets:425   AGAAGGAGCUCCCUUCAGUCCAA   447

2.5 TSA: Arachis hypogaea Unigene48910 mRNA sequence NA coding protein psRNATarget
GAER01039202.1
ncRNA:21   UCCCUCGAGGGAAGUCAGGUU   1
  ***||||||||||||*|||||
targets:74   UUUGAGCUCCCUUCACUCCAA   94

2.5 TSA: Arachis hypogaea Unigene39229 mRNA sequence NA coding protein psRNATarget