Search result

BaseInfo

ncRNA ID novel_ahy_miR270
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:122127858-122127967 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 87 - GAUUAAGAAUGGAUUGGUUCGGUU - 110
Stem-loop(if miRNA) --           G A  A              -       AC       UAUAU
  CUGAAUCAAUU A UU UAAUUGGUUUGGUU GGUUCGA  UUAUAUA     A
  ||||||||||| | || |||||||||||||| |||||||  |||||||     U
  GGCUUGGUUAG U AG AUUAGCUAAAUCAA CCAAGCU  GGUAUGU     A
UU           G A  A              A       CA       UUUUU
Stem-loop sequence CUGAAUCAAUUGAAUUAUAAUUGGUUUGGUUGGUUCGAACUUAUAUAUAUAUAUAUUUUUUGUAUGGACUCGAACCAAACUAAAUCGAUUAAGAAUGGAUUGGUUCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01049632.1
ncRNA:24   UUGGCUUGGUUAGGUAAGAAUUAG   1
  ||||||||||||||=|||||||||
targets:184   AACCGAACCAAUCCGUUCUUAAUC   207

1.5 TSA: Arachis hypogaea Unigene49669 mRNA sequence NA coding protein psRNATarget
EZ743619.1
ncRNA:24   UUGGCUUGGUUAGGUAAGAAUUAG   1
  ||||*|||||||||=|||||||||
targets:390   AACCAAACCAAUCCGUUCUUAAUC   413

1.5 TSA: Arachis hypogaea CL19742Contig1.Arhy mRNA sequence NA coding protein psRNATarget