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BaseInfo

ncRNA ID novel_ahy_miR263
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:21479629-21479766 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 115 - GAUUUUAGUGGCUGAUUUUGGUGU - 138
Stem-loop(if miRNA) --           G           U CAUCAAUG    UA    U          -GU   -UU   U    U
  AUCAAAAUCAG CACUAAAAUCA C        UAUU  UAUA AAAUACAUGU   AGU   AAU UAUU U
  ||||||||||| ||||||||||| |        ||||  |||| ||||||||||   |||   ||| |||| C
  UGGUUUUAGUC GUGAUUUUAGU G        AUAA  AUAU UUUAUGUACG   UUA   UUA AUAA A
UG           G           C --------    UC    -          ACU   UGU   U    U
Stem-loop sequence AUCAAAAUCAGGCACUAAAAUCAUCCAUCAAUGUAUUUAUAUAUAAAUACAUGUGUAGUUUAAUUUAUUUUCAUAAUAUAUUUGUAUUUCAGCAUGUAUUUUAUACUAAUAGCUGAUUUUAGUGGCUGAUUUUGGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR545342.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAG   1
  ||||||||||=|||||||||||||
targets:480   ACACCAAAAUUAGCCACUAAAAUC   503

1.0 TSA: Arachis hypogaea Ahy.Unigene4751 mRNA sequence NA coding protein psRNATarget
GAER01018195.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAG   1
  ||||||||||=|||||||||||||
targets:478   ACACCAAAAUUAGCCACUAAAAUC   501

1.0 TSA: Arachis hypogaea Unigene18203 mRNA sequence NA coding protein psRNATarget
GAER01018153.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAG   1
  *|||=|||||=|||||||||||||
targets:104   CCACUAAAAUUAGCCACUAAAAUC   127

1.0 TSA: Arachis hypogaea Unigene18161 mRNA sequence NA coding protein psRNATarget
EZ737709.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAG   1
  ||||||||||||||=|||||||||
targets:87   ACACCAAAAUCAGCUACUAAAAUC   110

1.5 TSA: Arachis hypogaea CL6259Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01050512.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAG   1
  |||||||||||||=||||||||||
targets:336   ACACCAAAAUCAGUCACUAAAAUC   359

1.5 TSA: Arachis hypogaea Unigene50550 mRNA sequence NA coding protein psRNATarget
EZ755628.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAG   1
  |||||||||||||||||||||=||
targets:575   ACACCAAAAUCAGCCACUAAAGUC   598

1.5 TSA: Arachis hypogaea CL1213Contig3.Arhy mRNA sequence NA coding protein psRNATarget
EZ755629.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAG   1
  |||=|||||||||=||||||||||
targets:186   ACAUCAAAAUCAGUCACUAAAAUC   209

1.5 TSA: Arachis hypogaea CL1213Contig4.Arhy mRNA sequence NA coding protein psRNATarget
JR576171.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAG   1
  *|==*||||||||=||||||||||
targets:110   UCGUAAAAAUCAGUCACUAAAAUC   133

1.5 TSA: Arachis hypogaea Ahy.Unigene39208 mRNA sequence NA coding protein psRNATarget
JR574174.1
ncRNA:22   UGGUUUUAGUCGGUGAUUUUAG   1
  ||=|||||||||||||||*||*
targets:1   ACUAAAAUCAGCCACUAAUAUA   22

2.5 TSA: Arachis hypogaea Ahy.Unigene37211 mRNA sequence NA coding protein psRNATarget