ncRNA ID | novel_ahy_miR260 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A03:12340089-12340304 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 193 - CAAUUAUUUCGAAAGGACAACGAG - 216 |
Stem-loop(if miRNA) |
--C               AC        ------------      C   UUC              GAUUUGUUUGAG      UU            --A   AUAUA         ACAA    AAUUAUUUCGAAAGG  AACGAGAU            AAAAAA ACA   AAUUCGGUUUUUGA            AUUUUU  UGGGACUGAUUA   UCU     CUAAAAAAA    C    |||||||||||||||  ||||||||            |||||| |||   ||||||||||||||            ||||||  ||||||||||||   |||     |||||||||    UUAAUGAAGUUUUCU  UUGCUCUA            UUUUUU UGU   UUAAGCCGAAGAUU            UAAAAA  ACCCUGAUUAAU   AGA     GGUUUUUUU    A CUA               -A        AGAACUGUUUUU      A   ---              ---------AAA      -U            CAA   --CAC         AAUU |
Stem-loop sequence | CAAUUAUUUCGAAAGGACAACGAGAUAAAAAACACAUUCAAUUCGGUUUUUGAGAUUUGUUUGAGAUUUUUUUUGGGACUGAUUAAUCUAUAUACUAAAAAAAACAACAUUAAUUUUUUUGGCACAGAAACUAAUUAGUCCCAUAAAAAUAAAUUAGAAGCCGAAUUUGUAUUUUUUUUUUUGUCAAGAAUCUCGUUAUCUUUUGAAGUAAUUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR545817.1 |
|
1.5 | TSA: Arachis hypogaea Ahy.Unigene5243 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01021780.1 |
|
1.5 | TSA: Arachis hypogaea Unigene21791 mRNA sequence | NA | coding protein | psRNATarget |