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BaseInfo

ncRNA ID novel_ahy_miR256
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A10:6755722-6755895 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 151 - AUGAAAAGGACGUAAUUACAAAAU - 174
Stem-loop(if miRNA) --          A      C   GU       GUA           UG       GUU G    U  ---AA   ---AUUUA       A
  UUUGUAAUUA GUCCUU UUA  GUAAAAA   UUAGAAUUAAC  AAUAUUU   C CAAA UG     GGU        UAAUUAA A
  |||||||||| |||||| |||  |||||||   |||||||||||  |||||||   | |||| ||     |||        |||||||
  AAACAUUAAU CAGGAA AGU  UAUUUUU   AAUUUUAAUUG  UUAUAAA   G GUUU AU     CCA        AUUAAUU A
UA          G      A   AC       -AC           UA       AAU -    U  GUACG   GUAUCUAA       C
Stem-loop sequence UUUGUAAUUAAGUCCUUCUUAGUGUAAAAAGUAUUAGAAUUAACUGAAUAUUUGUUCGCAAAUUGAAGGUAUUUAUAAUUAAAAACUUAAUUAAAUCUAUGACCGCAUGUAUUUUGGUAAAAAUAUUAUGUUAAUUUUAACAUUUUUAUCAUGAAAAGGACGUAAUUACAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ751215.1
ncRNA:24   UA--AAACAUUAAUGCAGGAAAAGUA   1
  ||--||||*||*||||||||||||||
targets:137   AUAAUUUGAAAAUACGUCCUUUUCAU   162

2.0 TSA: Arachis hypogaea CL19235Contig1.Arhy mRNA sequence NA coding protein psRNATarget