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BaseInfo

ncRNA ID novel_ahy_miR254
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:29657685-29657754 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 47 - CUUAUCUUGUUUAUACUGUAAACG - 70
Stem-loop(if miRNA) --             U            AUACAUU
  CUUAUCUUGUUUA ACUGUAAACGAG       C
  ||||||||||||| ||||||||||||
  GAAUAGAGCAAAU UGACAUUUGCUU       A
AU             U            AACUCAA
Stem-loop sequence CUUAUCUUGUUUAUACUGUAAACGAGAUACAUUCAAACUCAAUUCGUUUACAGUUUAAACGAGAUAAGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR578749.1
ncRNA:24   GCAAAUGUCAUAUUUGUUCUAUUC   1
  |*||||||||=|||||=|||||||
targets:54   CAUUUACAGUGUAAACGAGAUAAG   77

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GCAAAUGUCAUAUUUGUUCUAUUC   1
  |*||||||||=||||*||||||||
targets:32   CAUUUACAGUGUAAAGAAGAUAAG   55

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR566039.1
ncRNA:24   GCAAAUGUCAUAUUUGUUCUAUUC   1
  |||**|*|||||||||||*|||||
targets:582   CGUGAAAAGUAUAAACAACAUAAG   605

2.5 TSA: Arachis hypogaea Ahy.Unigene26240 mRNA sequence NA coding protein psRNATarget
EZ744207.1
ncRNA:24   GCAAAUGUCAUAUUUGUUCUAUUC   1
  |||**|*|||||||||||*|||||
targets:715   CGUGAAAAGUAUAAACAACAUAAG   738

2.5 TSA: Arachis hypogaea CL1332Contig2.Arhy mRNA sequence NA coding protein psRNATarget