Search result

BaseInfo

ncRNA ID novel_ahy_miR253
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:103703422-103703508 [+]
Reference genome Aradu_v1.0
Source SRR2922380;SRR2922381;SRR1323745
Length 21
Mature sequence(if miRNA) 67 - UCGAUAAACCUCUGCAUCCAG - 87
Stem-loop(if miRNA) --   G    C    C       UC   C  AA    GC    G
  GGA GCAG GGUU AUCGAUC  UUC UG  UUUG  UGUG A
  ||| |||| |||| |||||||  ||| ||  ||||  ||||
  CCU CGUC CCAA UAGCUGG  AAG AC  AAAC  AUAC A
GA   A    U    A       CU   A  -G    AC    U
Stem-loop sequence GGAGGCAGCGGUUCAUCGAUCUCUUCCUGAAUUUGGCUGUGGAAUCAUACACAAAGCAAGAAUCGGUCGAUAAACCUCUGCAUCCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR588813.1
ncRNA:21   GACCUACGUCUCCAAAUAGCU   1
  *|||*||||||||||||||*|
targets:31   GUGGCUGCAGAGGUUUAUCUA   51

2.5 TSA: Arachis hypogaea Ahy.Unigene57241 mRNA sequence NA coding protein psRNATarget
JR564267.1
ncRNA:21   GACCUACGUCUCCA-AAUAGCU   1
  ||||||||||||||-|||||||
targets:2   CUGGAUGCAGAGGUGUUAUCGA   23

3.0 TSA: Arachis hypogaea Ahy.Unigene24366 mRNA sequence NA coding protein psRNATarget