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BaseInfo

ncRNA ID novel_ahy_miR250
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:56239222-56239318 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 23
Mature sequence(if miRNA) 1 - UAUUUUAUGGCUUAUCUUGUGCU - 23
Stem-loop(if miRNA) --          A  CUA       -          CCUCCC  CA  UAA
  CACAAGAUAA CU   AAAAUGG GGUUUAUCAA      CA  CU   A
  |||||||||| ||   ||||||| ||||||||||      ||  ||
  GUGUUCUAUU GG   UUUUAUC UCAAAUAGUU      GU  GA   C
UC          C  -UA       A          ---CCU  AC  UAC
Stem-loop sequence CACAAGAUAAACUCUAAAAAUGGGGUUUAUCAACCUCCCCACACUUAAACCAUAGCAUGUCCUUGAUAAACUACUAUUUUAUGGCUUAUCUUGUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01050310.1
ncRNA:23   UCGUGUUCUAUUCGGUAUUUUAU   1
  ||||||||||||*||||||||||
targets:132   AGCACAAGAUAAACCAUAAAAUA   154

1.5 TSA: Arachis hypogaea Unigene50348 mRNA sequence NA coding protein psRNATarget
GAER01035498.1
ncRNA:23   UCGUGUUCUAUUCGGUAUUUUAU   1
  |*||||||||||*||||||||||
targets:712   AUCACAAGAUAAACCAUAAAAUA   734

1.5 TSA: Arachis hypogaea Unigene35521 mRNA sequence NA coding protein psRNATarget
GAER01053564.1
ncRNA:23   UCG--UGUUCUAUUCGGUAUUUUAU   1
  ||=--||||||*|||||||||||*|
targets:225   AGUUAACAAGAGAAGCCAUAAAAGA   249

2.5 TSA: Arachis hypogaea Unigene53603 mRNA sequence NA coding protein psRNATarget
JR559551.1
ncRNA:23   UCG--UGUUCUAUUCGGUAUUUUAU   1
  ||=--||||||*|||||||||||*|
targets:984   AGUUAACAAGAGAAGCCAUAAAAGA   1008

2.5 TSA: Arachis hypogaea Ahy.Unigene19489 mRNA sequence NA coding protein psRNATarget
GAER01027761.1
ncRNA:23   UCGUGUUCUAUUCGGUAUUUUAU   1
  ||-=|||*|||||||||||||*|
targets:217   AG-GCAAUAUAAGCCAUAAAAGA   238

2.5 TSA: Arachis hypogaea Unigene27779 mRNA sequence NA coding protein psRNATarget