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BaseInfo

ncRNA ID novel_ahy_miR242
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:127101818-127101892 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - GAGAGACUAUGCUAUUUGAACUAU - 24
Stem-loop(if miRNA) --    G      -C  U    A   U   -U    GAC
  GAGA ACUAUG  UA UUGA CUA AAU  UAUU   A
  |||| ||||||  || |||| ||| |||  ||||
  UUUU UGAUAC  AU AACU GAU UUA  AUAA   A
AU    G      UA  C    -   U   UU    AAA
Stem-loop sequence GAGAGACUAUGCUAUUUGAACUAUAAUUUAUUGACAAAAAAAUAUUAUUUUAGUCAACUAAUCAUAGUGUUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ724249.1
ncRNA:24   UAUCAAGUUUAUCGUAUCAGAGAG   1
  ||||*||||||=||||||||||||
targets:758   AUAGCUCAAAUGGCAUAGUCUCUC   781

1.5 TSA: Arachis hypogaea CL1Contig3265.Arhy mRNA sequence NA coding protein psRNATarget
GAER01002608.1
ncRNA:24   UAUCAAGUUUAUCGUAUCAGAGAG   1
  |||**||||||||=||||||||||
targets:57   AUAACUCAAAUAGUAUAGUCUCUC   80

1.5 TSA: Arachis hypogaea Unigene2609 mRNA sequence NA coding protein psRNATarget