Search result

BaseInfo

ncRNA ID novel_ahy_miR240
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:109726865-109726967 [+]
Reference genome Aradu_v1.0
Source SRR2922380;SRR2922381;SRR1323745
Length 21
Mature sequence(if miRNA) 83 - UCGGACCAGGCUUCAUUCCCC - 103
Stem-loop(if miRNA) --      UU      CU     GGUC       CUUCAUGAAUUGUUUGAU
  GGAAUG  GUCUGG  CGAGA    UUAUUAG                  U
  ||||||  ||||||  |||||    |||||||                  U
  CCUUAC  CGGACC  GCUCU    UAAUCAG                  G
CC      UU      AG     --AA       UGAAACUGAUUAGUAGUA
Stem-loop sequence GGAAUGUUGUCUGGCUCGAGAGGUCUUAUUAGCUUCAUGAAUUGUUUGAUUUGAUGAUGAUUAGUCAAAGUGACUAAUAAUCUCGGACCAGGCUUCAUUCCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01004180.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  |||||||||||||||||||||
targets:4   GGGGAAUGAAGCCUGGUCCGA   24

0.0 TSA: Arachis hypogaea Unigene4182 mRNA sequence NA coding protein psRNATarget
GAER01033028.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  |||||||||||||||||||||
targets:703   GGGGAAUGAAGCCUGGUCCGA   723

0.0 TSA: Arachis hypogaea Unigene33050 mRNA sequence NA coding protein psRNATarget
GAER01033028.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  |*|||||||||||||||||||
targets:900   GAGGAAUGAAGCCUGGUCCGA   920

0.0 TSA: Arachis hypogaea Unigene33050 mRNA sequence NA coding protein psRNATarget
GAER01019611.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||||||||||||||||||=
targets:114   CUGGAAUGAAGCCUGGUCCGG   134

1.0 TSA: Arachis hypogaea Unigene19620 mRNA sequence NA coding protein psRNATarget
GAER01019614.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||||||||||||||||||=
targets:114   CUGGAAUGAAGCCUGGUCCGG   134

1.0 TSA: Arachis hypogaea Unigene19623 mRNA sequence NA coding protein psRNATarget
GAER01019610.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||||||||||||||||||=
targets:825   CUGGAAUGAAGCCUGGUCCGG   845

1.0 TSA: Arachis hypogaea Unigene19619 mRNA sequence NA coding protein psRNATarget
JR540911.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||=|||||||||||||||=
targets:928   UUGGGAUGAAGCCUGGUCCGG   948

2.0 TSA: Arachis hypogaea Ahy.Unigene191 mRNA sequence NA coding protein psRNATarget
GAER01021484.1
ncRNA:21   CCCCUUACUUCGGACCAGGCU   1
  **||=|||||||||||||||=
targets:898   CUGGGAUGAAGCCUGGUCCGG   918

2.0 TSA: Arachis hypogaea Unigene21495 mRNA sequence NA coding protein psRNATarget