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BaseInfo

ncRNA ID novel_ahy_miR237
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:84328728-84328866 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 116 - CUUAUCUCGUUUACACUGUAAAAG - 139
Stem-loop(if miRNA) -    -                 A      A                A    C  G   - G  CA   A
 UUUU UAGUGUAAAUGAGAUAA AUUAUA GUAUUUUGUUUACAUU UAAA GA AUA A AC  CAU G
 |||| ||||||||||||||||| |||||| |||||||||||||||| |||| || ||| | ||  |||
 AAAA GUCACAUUUGCUCUAUU UAAUGU UAUAGAGCAGAUGUGA AUUU CU UAU U UG  GUA A
G    U                 C      A                C    A  A   A G  AA   A
Stem-loop sequence UUUUUAGUGUAAAUGAGAUAAAAUUAUAAGUAUUUUGUUUACAUUAUAAACGAGAUAAGACCACAUAGAAAUGAAGUGUAUAUAUCAUUUACAGUGUAGACGAGAUAUAUGUAAUCUUAUCUCGUUUACACUGUAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR578749.1
ncRNA:24   GA--AAAUGUCACAUUUGCUCUAUUC   1
  ||--||||||||||||||||||||||
targets:52   CUCAUUUACAGUGUAAACGAGAUAAG   77

0.0 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GA--AAAUGUCACAUUUGCUCUAUUC   1
  ||--||||||*||||||=||||||||
targets:184   CUCGUUUACACUGUAAAUGAGAUAAG   209

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
GAER01058827.1
ncRNA:24   GA--AAAUGUCACAUUUGCUCUAUUC   1
  ||--||||||||||||||||*||||*
targets:87   CUCGUUUACAGUGUAAACGAAAUAAU   112

2.5 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget