ncRNA ID | novel_ahy_miR236 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A03:83642726-83642935 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 187 - GUGUGUUGUAGUAUCAUUUAACGU - 210 |
Stem-loop(if miRNA) |
--    U    C                  U   GC     A  -A                                     C   A          UU UAAUG   GUUA GUGA ACUACAACACAUAUUUAA AGU  UAAUU GG  GCUAAUAUAAUAAAUUUAUGAAAUUAGAUCAAAUCAA GCC AAUUGAGGAA  C     C   |||| |||| |||||||||||||||||| |||  ||||| ||  ||||||||||||||||||||||||||||||||||||| ||| ||||||||||  |   CAAU UACU UGAUGUUGUGUGUGAAUU UUA  AUUAA CU  CGAUUGUAUUAUUUAAAUACUUUAAUCUAGUUUAGUU UGG UUAAUUCCUU  G     C UG    U    A                  U   AA     -  GA                                     U   A          CU UAACU |
Stem-loop sequence | GUUAUGUGACACUACAACACAUAUUUAAUAGUGCUAAUUAGGAGCUAAUAUAAUAAAUUUAUGAAAUUAGAUCAAAUCAACGCCAAAUUGAGGAAUUCUAAUGCCUCAAUGUCUUCCUUAAUUAGGUUUUGAUUUGAUCUAAUUUCAUAAAUUUAUUAUGUUAGCAGUCAAUUAAAAUUUUUAAGUGUGUGUUGUAGUAUCAUUUAACGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01027527.1 |
|
2.5 | TSA: Arachis hypogaea Unigene27545 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR559186.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene19106 mRNA sequence | NA | coding protein | psRNATarget |