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BaseInfo

ncRNA ID novel_ahy_miR236
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:83642726-83642935 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 187 - GUGUGUUGUAGUAUCAUUUAACGU - 210
Stem-loop(if miRNA) --    U    C                  U   GC     A  -A                                     C   A          UU UAAUG
  GUUA GUGA ACUACAACACAUAUUUAA AGU  UAAUU GG  GCUAAUAUAAUAAAUUUAUGAAAUUAGAUCAAAUCAA GCC AAUUGAGGAA  C     C
  |||| |||| |||||||||||||||||| |||  ||||| ||  ||||||||||||||||||||||||||||||||||||| ||| ||||||||||  |
  CAAU UACU UGAUGUUGUGUGUGAAUU UUA  AUUAA CU  CGAUUGUAUUAUUUAAAUACUUUAAUCUAGUUUAGUU UGG UUAAUUCCUU  G     C
UG    U    A                  U   AA     -  GA                                     U   A          CU UAACU
Stem-loop sequence GUUAUGUGACACUACAACACAUAUUUAAUAGUGCUAAUUAGGAGCUAAUAUAAUAAAUUUAUGAAAUUAGAUCAAAUCAACGCCAAAUUGAGGAAUUCUAAUGCCUCAAUGUCUUCCUUAAUUAGGUUUUGAUUUGAUCUAAUUUCAUAAAUUUAUUAUGUUAGCAGUCAAUUAAAAUUUUUAAGUGUGUGUUGUAGUAUCAUUUAACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01027527.1
ncRNA:24   UGCAAUUUACUAUGAUGUUGUGUG   1
  |***|||||||*|||||||||||*
targets:18   AAAGUAAAUGAAACUACAACACAG   41

2.5 TSA: Arachis hypogaea Unigene27545 mRNA sequence NA coding protein psRNATarget
JR559186.1
ncRNA:24   UGCAAUUUACUAUGAUGUUGUGUG   1
  |***|||||||*|||||||||||*
targets:169   AAAGUAAAUGAAACUACAACACAG   192

2.5 TSA: Arachis hypogaea Ahy.Unigene19106 mRNA sequence NA coding protein psRNATarget