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BaseInfo

ncRNA ID novel_ahy_miR228
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A02:14245806-14245865 [+]
Reference genome Aradu_v1.0
Source SRR2922380;SRR2922381
Length 21
Mature sequence(if miRNA) 1 - CUUAAUCAAACUCUUGUCAUC - 21
Stem-loop(if miRNA) --C                     -A  AG
   UUAAUCAAACUCUUGUCAUCA  GG  U
   |||||||||||||||||||||  ||  A
   AAUUAGUUUGAGAACGGUAGU  CC  A
AUA                     AA  AA
Stem-loop sequence CUUAAUCAAACUCUUGUCAUCAAGGAGUAAAACCAAUGAUGGCAAGAGUUUGAUUAAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR577860.1
ncRNA:21   CUACUGUUCUCAAACUAAUUC   1
  |||||||||||||||||||||
targets:116   GAUGACAAGAGUUUGAUUAAG   136

0.0 TSA: Arachis hypogaea Ahy.Unigene41370 mRNA sequence NA coding protein psRNATarget
JR549412.1
ncRNA:21   CUACUGUUCUCAAACUAAUUC   1
  ||||||||||*||||||||||
targets:282   GAUGACAAGAAUUUGAUUAAG   302

1.5 TSA: Arachis hypogaea Ahy.Unigene9003 mRNA sequence NA coding protein psRNATarget
GAER01027166.1
ncRNA:21   CUACUGUUCUCAAACUAAUUC   1
  ||||==|||||||||||||||
targets:818   GAUGGUAAGAGUUUGAUUAAG   838

2.0 TSA: Arachis hypogaea Unigene27184 mRNA sequence NA coding protein psRNATarget
GAER01034337.1
ncRNA:21   CUACUGUUCUCAAACUAAUUC   1
  ||||==|||||||||||||||
targets:826   GAUGGUAAGAGUUUGAUUAAG   846

2.0 TSA: Arachis hypogaea Unigene34360 mRNA sequence NA coding protein psRNATarget
JR572160.1
ncRNA:21   CUACUGUUCUCAAACUAAUUC   1
  *|*||||=||||||||||||*
targets:145   CAAGACAGGAGUUUGAUUAAA   165

3.0 TSA: Arachis hypogaea Ahy.Unigene34164 mRNA sequence NA coding protein psRNATarget