Search result

BaseInfo

ncRNA ID	novel_ahy_miR224
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A10:88226357-88226419 [+]
Reference genome	Aradu_v1.0
Source	SRR1323745
Length	24
Mature sequence(if miRNA)	1 - UUACACUGUAAACGAGAUAAGGCA - 24
Stem-loop(if miRNA)	--   C        CG     AG     AAAA   UUA ACUGUAAA  AGAUA  GCACG    G   ||| ||||||||  |||||  |||||   AAU UGGCAUUU  UUUAU  UGUGC    A CA   A        AU     -A     AGAG
Stem-loop sequence	UUACACUGUAAACGAGAUAAGGCACGAAAAGAGAGACGUGUAUAUUUUAUUUACGGUAUAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01058827.1	ncRNA:24   ACG-GAAUAGAGCAAAUGUCACAUU   1   |||-|*||||||||||||||||||| targets:78   UGCACGUAUCUCGUUUACAGUGUAA   102 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene58874 mRNA sequence	NA	coding protein	psRNATarget
JR578749.1	ncRNA:24   ACGGAAUAGAGCAAAUGUCACAUU   1   **|||||||||*|||||||||||| targets:44   AACCUUAUCUCAUUUACAGUGUAA   67 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence	NA	coding protein	psRNATarget
JR574604.1	ncRNA:24   ACGGAAUAGAGCAAAUGUCACAUU   1   ||*=|||||||*|||||||||||| targets:22   UGGUUUAUCUCAUUUACAGUGUAA   45 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence	NA	coding protein	psRNATarget
JR574604.1	ncRNA:24   ACGGAAUAGAGCAAAUGUCACAUU   1   ***|||||||||||||||*||||| targets:176   AUACUUAUCUCGUUUACACUGUAA   199 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence	NA	coding protein	psRNATarget
JR578749.1	ncRNA:24   ACGGAAUAGAGCAAAUGUCACAUU   1   ||||||||*|||||||=||||||| targets:146   UGCCUUAUGUCGUUUAUAGUGUAA   169 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence	NA	coding protein	psRNATarget