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BaseInfo

ncRNA ID novel_ahy_miR220
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A02:61786982-61787077 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - UUAUGGAAACCUCUCAAACUUGAG - 24
Stem-loop(if miRNA) --         UUA            AUC  -- ACCAUGUGGUAAAUA
  CGAGUUUGA   GUUUCCAUGAUG   AC  C               A
  |||||||||   ||||||||||||   ||  |               G
  GUUCAAACU   CAAAGGUAUUAC   UU  G               U
GA         CUC            -GA  UG GACAUACUGAGCUUU
Stem-loop sequence CGAGUUUGAUUAGUUUCCAUGAUGAUCACCACCAUGUGGUAAAUAAGUUUUCGAGUCAUACAGGGUUUAGCAUUAUGGAAACCUCUCAAACUUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01033491.1
ncRNA:24   GAGUUCAAACUCUCCAAAGGUAUU   1
  ||||||||||||||||||||||||
targets:1130   CUCAAGUUUGAGAGGUUUCCAUAA   1153

0.0 TSA: Arachis hypogaea Unigene33513 mRNA sequence NA coding protein psRNATarget
GAER01033489.1
ncRNA:24   GAGUUCAAACUCUCCAAAGGUAUU   1
  ||||||||||||||||||||||||
targets:1265   CUCAAGUUUGAGAGGUUUCCAUAA   1288

0.0 TSA: Arachis hypogaea Unigene33511 mRNA sequence NA coding protein psRNATarget