Search result

BaseInfo

ncRNA ID	novel_ahy_miR219
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A01:94030456-94030545 [+]
Reference genome	Aradu_v1.0
Source	SRR2922380;SRR2922381;SRR1323745
Length	21
Mature sequence(if miRNA)	1 - UUCCACAGCUUUCUUGAACUG - 21
Stem-loop(if miRNA)	--            C          UCUAAUUGUUGC     ----------   C   UUCCACAGCUUU UUGAACUGCA            AUGCA          UGC A   |||||||||||| ||||||||||            |||||          |||   AGGGUGUCGAAA AACUUGGCGU            UGCGU          ACG U GA            U          ------------     UCUUCUUCUC   G
Stem-loop sequence	UUCCACAGCUUUCUUGAACUGCAUCUAAUUGUUGCAUGCAUGCCAUGGCACUCUUCUUCUUGCGUUGCGGUUCAAUAAAGCUGUGGGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01058108.1	ncRNA:21   GUCAAGUUCUUUCGACACCUU   1   *|||||||||||||||||||| targets:401   AAGUUCAAGAAAGCUGUGGAA   421 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene58155 mRNA sequence	NA	coding protein	psRNATarget
JR551173.1	ncRNA:21   GUCAAGUUCUUUCGACACCUU   1   =**||||||||||*||||||| targets:120   UCUUUCAAGAAAGAUGUGGAA   140 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene10806 mRNA sequence	NA	coding protein	psRNATarget
EZ737408.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:354   CCGUUCAAGAAAGCCUGUGGAA   375 Target Full Sequence	3.0	TSA: Arachis hypogaea CL4713Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ723483.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:465   CCGUUCAAGAAAGCCUGUGGAA   486 Target Full Sequence	3.0	TSA: Arachis hypogaea CL1Contig2499.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR541443.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:261   CCGUUCAAGAAAGCCUGUGGAA   282 Target Full Sequence	3.0	TSA: Arachis hypogaea Ahy.Unigene758 mRNA sequence	NA	coding protein	psRNATarget
GAER01005144.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:2   CCGUUCAAGAAAGCCUGUGGAA   23 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene5149 mRNA sequence	NA	coding protein	psRNATarget
GAER01005145.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:2   CCGUUCAAGAAAGCCUGUGGAA   23 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene5150 mRNA sequence	NA	coding protein	psRNATarget
JR559502.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:560   CCGUUCAAGAAAGCCUGUGGAA   581 Target Full Sequence	3.0	TSA: Arachis hypogaea Ahy.Unigene19438 mRNA sequence	NA	coding protein	psRNATarget
GAER01043286.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:396   CCGUUCAAGAAAGCCUGUGGAA   417 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene43319 mRNA sequence	NA	coding protein	psRNATarget
GAER01018199.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:389   CCGUUCAAGAAAGCCUGUGGAA   410 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene18207 mRNA sequence	NA	coding protein	psRNATarget
JR541303.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:672   CCGUUCAAGAAAGCCUGUGGAA   693 Target Full Sequence	3.0	TSA: Arachis hypogaea Ahy.Unigene609 mRNA sequence	NA	coding protein	psRNATarget
GAER01018253.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:341   CCGUUCAAGAAAGCCUGUGGAA   362 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene18261 mRNA sequence	NA	coding protein	psRNATarget
JR556171.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:340   CCGUUCAAGAAAGCCUGUGGAA   361 Target Full Sequence	3.0	TSA: Arachis hypogaea Ahy.Unigene15978 mRNA sequence	NA	coding protein	psRNATarget
KC355794.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:477   CCGUUCAAGAAAGCCUGUGGAA   498 Target Full Sequence	3.0	Arachis hypogaea clone Contig9860 growth-regulating factor (GRF) mRNA, partial cds	NA	coding protein	psRNATarget
JR547702.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:632   CCGUUCAAGAAAGCCUGUGGAA   653 Target Full Sequence	3.0	TSA: Arachis hypogaea Ahy.Unigene7220 mRNA sequence	NA	coding protein	psRNATarget
GAER01018251.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:750   CCGUUCAAGAAAGCCUGUGGAA   771 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene18259 mRNA sequence	NA	coding protein	psRNATarget
EZ724866.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:617   CCGUUCAAGAAAGCCUGUGGAA   638 Target Full Sequence	3.0	TSA: Arachis hypogaea CL1Contig3882.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01018222.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:743   CCGUUCAAGAAAGCCUGUGGAA   764 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene18230 mRNA sequence	NA	coding protein	psRNATarget
GAER01018246.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:743   CCGUUCAAGAAAGCCUGUGGAA   764 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene18254 mRNA sequence	NA	coding protein	psRNATarget
GAER01018221.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:743   CCGUUCAAGAAAGCCUGUGGAA   764 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene18229 mRNA sequence	NA	coding protein	psRNATarget
GAER01019525.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:689   CCGUUCAAGAAAGCCUGUGGAA   710 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene19534 mRNA sequence	NA	coding protein	psRNATarget
GAER01018245.1	ncRNA:21   GUCAAGUUCUUUCG-ACACCUU   1   |*||||||||||||-||||||| targets:743   CCGUUCAAGAAAGCCUGUGGAA   764 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene18253 mRNA sequence	NA	coding protein	psRNATarget