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BaseInfo

ncRNA ID novel_ahy_miR218
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A02:71515289-71515368 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - UGCAUGGGUCGGGUGAAACCGGGU - 24
Stem-loop(if miRNA) --   A                A          CUC   GA
  UCG UUUCACCUGACCCAUG AUACCUCUAU   UUG  A
  ||| |||||||||||||||| ||||||||||   |||  U
  GGC AAAGUGGGCUGGGUAC UGUGGGGAUA   AAC  U
UG   C                G          ---   AG
Stem-loop sequence UCGAUUUCACCUGACCCAUGAAUACCUCUAUCUCUUGGAAUUGACAAAUAGGGGUGUGCAUGGGUCGGGUGAAACCGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01006664.1
ncRNA:24   UGGGCCAAAGUGGGCUGGGUACGU   1
  ||=||*||||||||||||||||||
targets:32   ACUCGAUUUCACCCGACCCAUGCA   55

1.0 TSA: Arachis hypogaea Unigene6670 mRNA sequence NA coding protein psRNATarget
GAER01024767.1
ncRNA:24   UGGGCCAAAGUGGGCUGGGUACGU   1
  |=|||||||||||||=||||||||
targets:168   AUCCGGUUUCACCCGGCCCAUGCA   191

1.5 TSA: Arachis hypogaea Unigene24784 mRNA sequence NA coding protein psRNATarget
JR556991.1
ncRNA:24   UGGGCCAAA-GUGGGCUGGGUACGU   1
  ||=||||||-|||||||||||||||
targets:184   ACUCGGUUUUCACCCGACCCAUGCA   208

2.0 TSA: Arachis hypogaea Ahy.Unigene16817 mRNA sequence NA coding protein psRNATarget
GAER01005403.1
ncRNA:24   UGGGCCAAA-GUGGGCUGGGUACGU   1
  ||=||||||-|||||||||||||||
targets:169   ACUCGGUUUUCACCCGACCCAUGCA   193

2.0 TSA: Arachis hypogaea Unigene5408 mRNA sequence NA coding protein psRNATarget