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BaseInfo

ncRNA ID novel_ahy_miR214
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A09:87471879-87471993 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AAUCGAUUGAAUUUUGCAAGGCAU - 24
Stem-loop(if miRNA) --             U  C     --    GA     UUCUUA           --   U
  AAUCGAUUGAAUU UG AAGGC  AUGU  GUUUU      UUCAAUCGAUU  GUU G
  ||||||||||||| || |||||  ||||  |||||      |||||||||||  ||| U
  UUAGUUAAUUUAA AC UUUUG  UAUA  CGAAA      AAGUUAGCUAA  CAA U
GG             C  -     AC    -A     CUACUG           UC   U
Stem-loop sequence AAUCGAUUGAAUUUUGCAAGGCAUGUGAGUUUUUUCUUAUUCAAUCGAUUGUUUGUUUAACCUAAUCGAUUGAAGUCAUCAAAGCAAUAUCAGUUUUCACAAUUUAAUUGAUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000335.1
ncRNA:24   UACG--GAACGUUUUAAGUUAGCUAA   1
  *|||--=|||||||||||||||*||*
targets:35   UUGCAAUUUGCAAAAUUCAAUCUAUA   60

2.5 TSA: Arachis hypogaea Unigene335 mRNA sequence NA coding protein psRNATarget