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BaseInfo

ncRNA ID novel_ahy_miR213
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A09:87409683-87409833 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - UCACUUUAGAUUUGGCACCAA - 21
Stem-loop(if miRNA) --  A      A        C               CA     A   C        AUA   -CAAAA   CUUAU
  UC CUUUAG UUUGGCAC AAAUGCUUGAUGAAA  AUGCC UUU ACCUUAAU   CCA      UGU     U
  || |||||| |||||||| |||||||||||||||  ||||| ||| ||||||||   |||      |||     C
  AG GAAGUC AAACCGUG UUUACGAACUACUUU  UGCGG AAA UGGAAUUA   GGU      ACA     C
AC  C      A        A               AC     C   U        -CC   AUGUAA   ACACC
Stem-loop sequence UCACUUUAGAUUUGGCACCAAAUGCUUGAUGAAACAAUGCCAUUUCACCUUAAUAUACCACAAAAUGUCUUAUUCCCCACAACAAAUGUAUGGCCAUUAAGGUUAAACGGCGUCAUUUCAUCAAGCAUUUAGUGCCAAAACUGAAGCGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01049656.1
ncRNA:21   AACCACGGUUUAGAUUUCACU   1
  |||||||||||||||||||||
targets:186   UUGGUGCCAAAUCUAAAGUGA   206

0.0 TSA: Arachis hypogaea Unigene49693 mRNA sequence NA coding protein psRNATarget