Search result

BaseInfo

ncRNA ID	novel_ahy_miR212
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A10:86906541-86906623 [+]
Reference genome	Aradu_v1.0
Source	SRR1323745
Length	20
Mature sequence(if miRNA)	1 - UGACAGAAGAGAGUGAGCAC - 20
Stem-loop(if miRNA)	--         -   -        A  GA    CU  U    A   UGACAGAAG AGA GUGAGCAC CA  AGCA  CG UAUA U   ||||||||| ||| |||||||| ||  ||||  || ||||   ACUGUCUUC UCU CACUCGUG GU  UCGU  GC AUAU U CG         C   U        C  UC    -U  C    C
Stem-loop sequence	UGACAGAAGAGAGUGAGCACACAGAAGCACUCGUUAUAAUUCUAUACCGUUGCUCUUGCGUGCUCACUUCUCCUUCUGUCAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01017618.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   |||||||||||||||||||| targets:3   GUGCUCACUCUCUUCUGUCA   22 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene17626 mRNA sequence	NA	coding protein	psRNATarget
KF312227.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:971   GUGCUCUCUCUCUUCUGUCA   990 Target Full Sequence	1.0	Arachis hypogaea squamosa promoter-binding-like protein (SPL6) mRNA, complete cds	NA	coding protein	psRNATarget
KF312224.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:1058   GUGCUCUCUCUCUUCUGUCA   1077 Target Full Sequence	1.0	Arachis hypogaea squamosa promoter-binding-like protein (SPL2) mRNA, complete cds	NA	coding protein	psRNATarget
KF312232.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:953   GUGCUCUCUCUCUUCUGUCA   972 Target Full Sequence	1.0	Arachis hypogaea squamosa promoter-binding-like protein (SPL13) mRNA, complete cds	NA	coding protein	psRNATarget
KF312230.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:737   GUGCUCUCUCUCUUCUGUCA   756 Target Full Sequence	1.0	Arachis hypogaea squamosa promoter-binding-like protein (SPL9) mRNA, complete cds	NA	coding protein	psRNATarget
GAER01036043.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:453   GUGCUCUCUCUCUUCUGUCA   472 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene36066 mRNA sequence	NA	coding protein	psRNATarget
GAER01036042.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:411   GUGCUCUCUCUCUUCUGUCA   430 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene36065 mRNA sequence	NA	coding protein	psRNATarget
GAER01034180.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:459   GUGCUCUCUCUCUUCUGUCA   478 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene34203 mRNA sequence	NA	coding protein	psRNATarget
GAER01032418.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:377   GUGCUCUCUCUCUUCUGUCA   396 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene32440 mRNA sequence	NA	coding protein	psRNATarget
GAER01058778.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:419   GUGCUCUCUCUCUUCUGUCA   438 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene58825 mRNA sequence	NA	coding protein	psRNATarget
GAER01050675.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:148   GUGCUCUCUCUCUUCUGUCA   167 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene50713 mRNA sequence	NA	coding protein	psRNATarget
GAER01053340.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:172   GUGCUCUCUCUCUUCUGUCA   191 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene53379 mRNA sequence	NA	coding protein	psRNATarget
JR562747.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:18   GUGCUCUCUCUCUUCUGUCA   37 Target Full Sequence	1.0	TSA: Arachis hypogaea Ahy.Unigene22790 mRNA sequence	NA	coding protein	psRNATarget
EZ737183.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:1   GUGCUCUCUCUCUUCUGUCA   20 Target Full Sequence	1.0	TSA: Arachis hypogaea CL3723Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR587096.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||||||||||||| targets:100   GUGCUCUCUCUCUUCUGUCA   119 Target Full Sequence	1.0	TSA: Arachis hypogaea Ahy.Unigene55524 mRNA sequence	NA	coding protein	psRNATarget
GAER01051195.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   *|||||*||||=|||||||| targets:574   AUGCUCUCUCUUUUCUGUCA   593 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene51233 mRNA sequence	NA	coding protein	psRNATarget
EZ721192.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   *|||||*||||=|||||||| targets:529   AUGCUCUCUCUUUUCUGUCA   548 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1Contig208.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ756262.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||*|||||||||| targets:936   GUGCUCUCUAUCUUCUGUCA   955 Target Full Sequence	2.5	TSA: Arachis hypogaea CL3710Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
KF312234.1	ncRNA:20   CACGAGUGAGAGAAGACAGU   1   ||||||*||*|||||||||| targets:824   GUGCUCUCUAUCUUCUGUCA   843 Target Full Sequence	2.5	Arachis hypogaea squamosa promoter-binding-like protein (SPL16) mRNA, complete cds	NA	coding protein	psRNATarget