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BaseInfo

ncRNA ID novel_ahy_miR203
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A08:49107999-49108134 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AAUUUUAGUGGCUGAUUUUGGUGU - 24
Stem-loop(if miRNA) --               CU    C       C     -AAAUA AUAUUGAAAUAUAAAUAUAUUAAA
  AUCAAAAUCAGCCAC  AAGU AGUUAUC AUAUA      C                        A
  |||||||||||||||  |||| ||||||| |||||      |                        A
  UGGUUUUAGUCGGUG  UUUA UCAGUGG UAUAU      A                        U
UG               AU    A       U     AAACAG UAUUUAUGUAGGCAGUAAAUUAAA
Stem-loop sequence AUCAAAAUCAGCCACCUAAGUCAGUUAUCCAUAUAAAAUACAUAUUGAAAUAUAAAUAUAUUAAAAAUAAAUUAAAUGACGGAUGUAUUUAUAGACAAAUAUAUUGGUGACUAAUUUUAGUGGCUGAUUUUGGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01018153.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  ||*|||||||||||||||||||||
targets:91   ACCCCAAAAUCAGCCACUAAAAUU   114

0.0 TSA: Arachis hypogaea Unigene18161 mRNA sequence NA coding protein psRNATarget
JR545342.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  ||||||||||=||||||||||||*
targets:480   ACACCAAAAUUAGCCACUAAAAUC   503

2.0 TSA: Arachis hypogaea Ahy.Unigene4751 mRNA sequence NA coding protein psRNATarget
GAER01018195.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  ||||||||||=||||||||||||*
targets:478   ACACCAAAAUUAGCCACUAAAAUC   501

2.0 TSA: Arachis hypogaea Unigene18203 mRNA sequence NA coding protein psRNATarget
EZ737709.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  ||||||||||||||=||||||||*
targets:87   ACACCAAAAUCAGCUACUAAAAUC   110

2.5 TSA: Arachis hypogaea CL6259Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01050512.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  |||||||||||||=|||||||||*
targets:336   ACACCAAAAUCAGUCACUAAAAUC   359

2.5 TSA: Arachis hypogaea Unigene50550 mRNA sequence NA coding protein psRNATarget
EZ755628.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  |||||||||||||||||||||=|*
targets:575   ACACCAAAAUCAGCCACUAAAGUC   598

2.5 TSA: Arachis hypogaea CL1213Contig3.Arhy mRNA sequence NA coding protein psRNATarget
EZ755629.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  |||=|||||||||=|||||||||*
targets:186   ACAUCAAAAUCAGUCACUAAAAUC   209

2.5 TSA: Arachis hypogaea CL1213Contig4.Arhy mRNA sequence NA coding protein psRNATarget
JR588378.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  *=|==||=||||*|||||||||||
targets:12   UUAUUAAGAUCAUCCACUAAAAUU   35

2.5 TSA: Arachis hypogaea Ahy.Unigene56806 mRNA sequence NA coding protein psRNATarget
JR574174.1
ncRNA:22   UGGUUUUAGUCGGUGAUUUUAA   1
  ||=|||||||||||||||*||*
targets:1   ACUAAAAUCAGCCACUAAUAUA   22

2.5 TSA: Arachis hypogaea Ahy.Unigene37211 mRNA sequence NA coding protein psRNATarget
JR576171.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  *|==*||||||||=|||||||||*
targets:110   UCGUAAAAAUCAGUCACUAAAAUC   133

2.5 TSA: Arachis hypogaea Ahy.Unigene39208 mRNA sequence NA coding protein psRNATarget
GAER01008177.1
ncRNA:24   UGUGGUUUUAGUCGGUGAUUUUAA   1
  *||*||||*|||||||||||||*|
targets:36   UCAGCAAACUCAGCCACUAAAAGU   59

2.5 TSA: Arachis hypogaea Unigene8184 mRNA sequence NA coding protein psRNATarget
JR548577.1
ncRNA:24   UGU-GGUUUUAGUCG-GUGAUUUUAA   1
  =||-=||||||||||-||||||||||
targets:734   GCAGUCAAAAUCAGCACACUAAAAUU   759

3.0 TSA: Arachis hypogaea Ahy.Unigene8136 mRNA sequence NA coding protein psRNATarget