ncRNA ID | novel_ahy_miR202 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A08:43956031-43956185 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUACCCCUGACGGCUAAUUUUUCA - 24 |
Stem-loop(if miRNA) |
--     CC   CG     U                       UC     C   UU   -------AA  ACAACCCUCAA   AUACC  UGA  GCUAA UUUUCAAAAAAUUUAAGACCAAU  AACAA AAU  CAU         GA           C   |||||  |||  ||||| |||||||||||||||||||||||  ||||| |||  |||         ||           A   UAUGG  GUU  CGAUU AAAAGUUUUUUAAAUUCUGGUUA  UUGUU UUA  GUA         CG           C UA     AA   AU     U                       GA     A   -U   CUUUUAAUA  AACUAAACGAA |
Stem-loop sequence | AUACCCCUGACGGCUAAUUUUUCAAAAAAUUUAAGACCAAUUCAACAACAAUUUCAUAAGAACAACCCUCAACACAAGCAAAUCAAGCAUAAUUUUCAUGUAUUAUUGUUAGAUUGGUCUUAAAUUUUUUGAAAAUUUAGCUAUUGAAGGUAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ742753.1 |
|
2.5 | TSA: Arachis hypogaea CL13559Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |