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BaseInfo

ncRNA ID novel_ahy_miR202
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A08:43956031-43956185 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AUACCCCUGACGGCUAAUUUUUCA - 24
Stem-loop(if miRNA) --     CC   CG     U                       UC     C   UU   -------AA  ACAACCCUCAA
  AUACC  UGA  GCUAA UUUUCAAAAAAUUUAAGACCAAU  AACAA AAU  CAU         GA           C
  |||||  |||  ||||| |||||||||||||||||||||||  ||||| |||  |||         ||           A
  UAUGG  GUU  CGAUU AAAAGUUUUUUAAAUUCUGGUUA  UUGUU UUA  GUA         CG           C
UA     AA   AU     U                       GA     A   -U   CUUUUAAUA  AACUAAACGAA
Stem-loop sequence AUACCCCUGACGGCUAAUUUUUCAAAAAAUUUAAGACCAAUUCAACAACAAUUUCAUAAGAACAACCCUCAACACAAGCAAAUCAAGCAUAAUUUUCAUGUAUUAUUGUUAGAUUGGUCUUAAAUUUUUUGAAAAUUUAGCUAUUGAAGGUAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ742753.1
ncRNA:24   ACUUUUUAAUCGGCAGUCCCCAUA   1
  |*|||||*||||||||||||*|||
targets:262   UAAAAAAGUAGCCGUCAGGGAUAU   285

2.5 TSA: Arachis hypogaea CL13559Contig1.Arhy mRNA sequence NA coding protein psRNATarget