Search result

BaseInfo

ncRNA ID	novel_ahy_miR200
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A08:36590907-36591040 [+]
Reference genome	Aradu_v1.0
Source	SRR1323745
Length	24
Mature sequence(if miRNA)	111 - CUGAUUUUAGUGGCUGAUUUUGGU - 134
Stem-loop(if miRNA)	--        A             UC    -------      -   -U         C    -----    UU   UAAAAUCA UUACUAAAAUCAG  AUCA       AUGUAU UUG  AUAUAAAUA AUAU     AUAA  U   |||||||| |||||||||||||  ||||       |||||| |||  ||||||||| ||||     ||||   GUUUUAGU GGUGAUUUUAGUC  UAGU       UAUAUA AAC  UAUAUUUAU UAUA     UAUU  A UG        C             CA    CAUAUUU      C   CU         A    AUUUU    UA
Stem-loop sequence	UAAAAUCAAUUACUAAAAUCAGUCAUCAAUGUAUUUGUAUAUAAAUACAUAUAUAAUUUAAUUUAUUUUUAAUAUAUAUUUAUAUUCCAACAUAUAUUUUAUACUGAUACCUGAUUUUAGUGGCUGAUUUUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JR545342.1	ncRNA:24   UGGUUUUAGUCGGUGAUUUUAGUC   1   ||||||||=||||||||||||||| targets:482   ACCAAAAUUAGCCACUAAAAUCAG   505 Target Full Sequence	1.0	TSA: Arachis hypogaea Ahy.Unigene4751 mRNA sequence	NA	coding protein	psRNATarget
GAER01018195.1	ncRNA:24   UGGUUUUAGUCGGUGAUUUUAGUC   1   ||||||||=||||||||||||||| targets:480   ACCAAAAUUAGCCACUAAAAUCAG   503 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene18203 mRNA sequence	NA	coding protein	psRNATarget
GAER01018153.1	ncRNA:24   UGGUUUUAGUCGGUGAUUUUAGUC   1   ||=|||||=||||||||||||||| targets:106   ACUAAAAUUAGCCACUAAAAUCAG   129 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene18161 mRNA sequence	NA	coding protein	psRNATarget
EZ737709.1	ncRNA:24   UGGUUUUAGUCGGUGAUUUUAGUC   1   ||||||||||||=||||||||||| targets:89   ACCAAAAUCAGCUACUAAAAUCAG   112 Target Full Sequence	1.5	TSA: Arachis hypogaea CL6259Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01050512.1	ncRNA:24   UGGUUUUAGUCGGUGAUUUUAGUC   1   |||||||||||=|||||||||||| targets:338   ACCAAAAUCAGUCACUAAAAUCAG   361 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene50550 mRNA sequence	NA	coding protein	psRNATarget
EZ755628.1	ncRNA:24   UGGUUUUAGUCGGUGAUUUUAGUC   1   |||||||||||||||||||=|||| targets:577   ACCAAAAUCAGCCACUAAAGUCAG   600 Target Full Sequence	1.5	TSA: Arachis hypogaea CL1213Contig3.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ755629.1	ncRNA:24   UGGUUUUAGUCGGUGAUUUUAGUC   1   |=|||||||||=|||||||||||| targets:188   AUCAAAAUCAGUCACUAAAAUCAG   211 Target Full Sequence	1.5	TSA: Arachis hypogaea CL1213Contig4.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR576171.1	ncRNA:24   UGGUUUUAGUCGGUGAUUUUAGUC   1   ==*||||||||=|||||||||||| targets:112   GUAAAAAUCAGUCACUAAAAUCAG   135 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene39208 mRNA sequence	NA	coding protein	psRNATarget