Search result

BaseInfo

ncRNA ID novel_ahy_miR197
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A08:26977457-26977531 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - UGCAUUUGCACCUGCACUUUA - 21
Stem-loop(if miRNA) --    UU  C           -A  UG    -    A
  UGCA  UG ACCUGCACUUU  CU  GUUU UCUC A
  ||||  || |||||||||||  ||  |||| |||| G
  ACGU  AC UGGACGUGGAG  GA  CAAG AGGG A
GG    CU  A           AA  GU    G    A
Stem-loop sequence UGCAUUUGCACCUGCACUUUACUUGGUUUUCUCAAGAAGGGAGGAACUGAGAAGAGGUGCAGGUACAUCUGCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR562490.1
ncRNA:21   AUUUCACGUCCACGUUUACGU   1
  |=||*|||||*||||||||||
targets:505   UGAACUGCAGAUGCAAAUGCA   525

2.5 TSA: Arachis hypogaea Ahy.Unigene22526 mRNA sequence NA coding protein psRNATarget
JR590381.1
ncRNA:21   AUUUCACGUCCACGUUUACGU   1
  **||*||||||*|||||||||
targets:16   GCAAUUGCAGGAGCAAAUGCA   36

2.5 TSA: Arachis hypogaea Ahy.Unigene58809 mRNA sequence NA coding protein psRNATarget
GAER01041077.1
ncRNA:21   AUUUCACGUCCACGUUUACGU   1
  **||*||||||*|||||||||
targets:383   GCAAUUGCAGGAGCAAAUGCA   403

2.5 TSA: Arachis hypogaea Unigene41108 mRNA sequence NA coding protein psRNATarget
GAER01051995.1
ncRNA:21   AUUUCACGUCCACGUUUACGU   1
  **||*||||||*|||||||||
targets:152   GCAAUUGCAGGAGCAAAUGCA   172

2.5 TSA: Arachis hypogaea Unigene52033 mRNA sequence NA coding protein psRNATarget