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BaseInfo

ncRNA ID novel_ahy_miR196
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A08:26946330-26946429 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AAAUAAGAGUUGGUAGAAGUUGGC - 24
Stem-loop(if miRNA) --                           -------------      C G     
  AAAUAAGAGUUGGUAGAAGUUGGCAGA             ACGUAG G AACCGA
  |||||||||||||||||||||||||||             |||||| | |||||A
  UUUAUUCUCAACCGUCUUCAACCGUCU             UGCAUC C UUGGCA
UA                           AUACGACAACCAU      A A     
Stem-loop sequence AAAUAAGAGUUGGUAGAAGUUGGCAGAACGUAGCGGAACCGAAACGGUUACACUACGUUACCAACAGCAUAUCUGCCAACUUCUGCCAACUCUUAUUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01020206.1
ncRNA:24   CGGUUGAAGAUGGUUGAGAAUAAA   1
  *||=||||||=|||||||||||||
targets:394   UCCGACUUCUGCCAACUCUUAUUU   417

1.0 TSA: Arachis hypogaea Unigene20216 mRNA sequence NA coding protein psRNATarget
GAER01023795.1
ncRNA:24   CGGUUGAAGAUGGUUGAGAAUAAA   1
  ||||||||||=||||||||||||*
targets:515   GCCAACUUCUGCCAACUCUUAUUG   538

2.0 TSA: Arachis hypogaea Unigene23806 mRNA sequence NA coding protein psRNATarget
GAER01023797.1
ncRNA:24   CGGUUGAAGAUGGUUGAGAAUAAA   1
  ||||||||||=||||||||||||*
targets:334   GCCAACUUCUGCCAACUCUUAUUG   357

2.0 TSA: Arachis hypogaea Unigene23808 mRNA sequence NA coding protein psRNATarget
GAER01023796.1
ncRNA:24   CGGUUGAAGAUGGUUGAGAAUAAA   1
  ||=|||||||=||||||||||||*
targets:388   GCUAACUUCUGCCAACUCUUAUUG   411

2.0 TSA: Arachis hypogaea Unigene23807 mRNA sequence NA coding protein psRNATarget
EZ731536.1
ncRNA:24   CGGUUGAAGAUGGUUGAGAAUAAA   1
  ||||||||||==||||||||||||
targets:982   GCCAACUUCUGUCAACUCUUAUUU   1005

2.5 TSA: Arachis hypogaea CL1Contig10552.Arhy mRNA sequence NA coding protein psRNATarget
JR544807.1
ncRNA:24   CGGUUGAAGAUGGUUGAGAAUAAA   1
  ||||||||||==||||||||||||
targets:485   GCCAACUUCUGUCAACUCUUAUUU   508

2.5 TSA: Arachis hypogaea Ahy.Unigene4203 mRNA sequence NA coding protein psRNATarget
GAER01013279.1
ncRNA:24   CGGUUGAAGAUGGUUGAGAAUAAA   1
  *|||||||||==||||||||||||
targets:111   ACCAACUUCUGUCAACUCUUAUUU   134

2.5 TSA: Arachis hypogaea Unigene13287 mRNA sequence NA coding protein psRNATarget
GAER01047814.1
ncRNA:24   CGGUUGAAGAUGGUUGAGAAUAAA   1
  |||||=*|||=|||||||||||||
targets:117   GCCAAUAUCUGCCAACUCUUAUUU   140

3.0 TSA: Arachis hypogaea Unigene47850 mRNA sequence NA coding protein psRNATarget