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BaseInfo

ncRNA ID novel_ahy_miR194
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A08:16484718-16484928 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AUUAACUGAUAGCAUACAUGACAC - 24
Stem-loop(if miRNA) --       G   G                CA          AAC   G                     C            CUAUUUUUCUAA      AAACUC
  AUUAACU AUA CAUACAUGACACCUAG  UAUCUAAUUG   GCU AAUAAAUAUAUUUAUGGAAAU UAUCAAUUUAGU            UUAUAU      U
  ||||||| ||| ||||||||||||||||  ||||||||||   ||| ||||||||||||||||||||| ||||||||||||            ||||||
  UAAUUGA UAU GUAUGUAUUGUGGAUC  AUAGAUUAAU   CGA UUGUUUAUAUAAAUACUUUUA AUAGUUAAAUCA            AAUAUA      A
UA       G   A                AG          CUA   G                     A            ---CAACAAUCC      AUCCUA
Stem-loop sequence AUUAACUGAUAGCAUACAUGACACCUAGCAUAUCUAAUUGAACGCUGAAUAAAUAUAUUUAUGGAAAUCUAUCAAUUUAGUCUAUUUUUCUAAUUAUAUAAACUCUAAUCCUAAUAUAACCUAACAACACUAAAUUGAUAAAUUUUCAUAAAUAUAUUUGUUGAGCAUCUAAUUAGAUAGACUAGGUGUUAUGUAUGAUAUGAGUUAAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  ||||||||||||||||||||||||
targets:725   GUGUCAUGUAUGCUAUCAGUUAAU   748

0.0 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ735986.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  *|||=*|*|||||||||||||||*
targets:18   UUGUUUUAUAUGCUAUCAGUUAAA   41

3.0 TSA: Arachis hypogaea CL1Contig15002.Arhy mRNA sequence NA coding protein psRNATarget
GAER01049126.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  *|||=*|*|||||||||||||||*
targets:47   UUGUUUUAUAUGCUAUCAGUUAAA   70

3.0 TSA: Arachis hypogaea Unigene49163 mRNA sequence NA coding protein psRNATarget