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BaseInfo

ncRNA ID novel_ahy_miR190
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A09:61082354-61082414 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UACACUGUAAACGAGAUAAGGCUG - 24
Stem-loop(if miRNA) --    C             -AG    AGAA
  UACA UGUAAACGAGAUA   GCUG    U
  |||| |||||||||||||   ||||
  AUGU ACAUUUGCUUUAU   CGAC    A
AA    A             AUA    GUAA
Stem-loop sequence UACACUGUAAACGAGAUAAGGCUGAGAAUAAAUGCAGCAUAUAUUUCGUUUACAAUGUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   GUCG-GAAUAGAGCAAAUGUCACAU   1
  =*||-|*||||||||||||||||||
targets:77   UUGCACGUAUCUCGUUUACAGUGUA   101

1.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   GUCGGAAUAGAGCAAAUGUCACAU   1
  ||*|||||||||*|||||||||||
targets:43   CAACCUUAUCUCAUUUACAGUGUA   66

1.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GU-CGGAAUAGAGCAAAUGUCACAU   1
  ||-|*=|||||||*|||||||||||
targets:20   CAUGGUUUAUCUCAUUUACAGUGUA   44

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GUCGGAAUAGAGCAAAUGUCACAU   1
  =|**|||||||||||||||*||||
targets:175   UAUACUUAUCUCGUUUACACUGUA   198

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   GUCGGAAUAGAGCAAAUGUCACAU   1
  **|||||||*|||||||=||||||
targets:145   GUGCCUUAUGUCGUUUAUAGUGUA   168

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget