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BaseInfo

ncRNA ID novel_ahy_miR184
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A08:33113802-33114016 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 192 - AUUAACUGAUAGCAUAUAUGACAC - 215
Stem-loop(if miRNA) --       G   G            C        C        CG UAGU    C                               UC     CUCAAUUCUAUAAACC
  AUUAACU AUA CAUAUAUGACAC UAAUAUGU UAAUUGGA  U    UGAA AAAUAUAUUUAUAAAAAUUUGUCAAUUUAGU  AUUGU                C
  ||||||| ||| |||||||||||| |||||||| ||||||||  |    |||| |||||||||||||||||||||||||||||||  |||||                U
  UAAUUGA UGU GUAUAUACUGUG AUUGUAUA AUUAAUCU  G    ACUU UUUAUAUAAAUAUUUUUAAAUAGUUAAAUUA  UAACA                A
UA       G   A            A        A        AU ----    A                               --     AUCUAAUAUAAUCCUA
Stem-loop sequence AUUAACUGAUAGCAUAUAUGACACCUAAUAUGUCUAAUUGGACGUUAGUUGAACAAAUAUAUUUAUAAAAAUUUGUCAAUUUAGUUCAUUGUCUCAAUUCUAUAAACCCUAAUCCUAAUAUAAUCUAACAAUAUUAAAUUGAUAAAUUUUUAUAAAUAUAUUUAUUCAGUAUCUAAUUAAAUAUGUUAAGUGUCAUAUAUGAUGUGAGUUAAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   CACAGUAUAUACGAUAGUCAAUUA   1
  |||||||=||||||||||||||||
targets:725   GUGUCAUGUAUGCUAUCAGUUAAU   748

1.0 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ735986.1
ncRNA:24   CACAGUAUAUACGAUAGUCAAUUA   1
  *|||=*|||||||||||||||||*
targets:18   UUGUUUUAUAUGCUAUCAGUUAAA   41

2.0 TSA: Arachis hypogaea CL1Contig15002.Arhy mRNA sequence NA coding protein psRNATarget
GAER01049126.1
ncRNA:24   CACAGUAUAUACGAUAGUCAAUUA   1
  *|||=*|||||||||||||||||*
targets:47   UUGUUUUAUAUGCUAUCAGUUAAA   70

2.0 TSA: Arachis hypogaea Unigene49163 mRNA sequence NA coding protein psRNATarget