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BaseInfo

ncRNA ID novel_ahy_miR180
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A07:60737896-60737971 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 53 - AUUAAAUAUUUUAAGAGUCGUCGU - 76
Stem-loop(if miRNA) --    U          A   CG  -     -----U   A
  GAUG AUUUUUGAAA AUU  GU UUAAG      GUC A
  |||| |||||||||| |||  || |||||      ||| A
  CUGC UGAGAAUUUU UAA  UA GAUUU      CGG C
UG    -          A   AU  U     UAUACU   A
Stem-loop sequence GAUGUAUUUUUGAAAAAUUCGGUUUAAGUGUCAAACAGGCUCAUAUUUUAGUAUUAAAUAUUUUAAGAGUCGUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR558552.1
ncRNA:24   UGCUGCUGAGAAUUUUAUAAAUUA   1
  |=|*=|*||=*|||||||||||||
targets:1843   AUGUUGUCUUGUAAAAUAUUUAAU   1866

3.0 TSA: Arachis hypogaea Ahy.Unigene18438 mRNA sequence NA coding protein psRNATarget