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BaseInfo

ncRNA ID novel_ahy_miR175
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:10660514-10660639 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AACGUUAGAGACUUAAAUAAGACG - 24
Stem-loop(if miRNA) -U   -                   C       U      U          ---UUCA     G
  UCU AUUUAAGUCUCUAACGUUU AAAAUUG CUCAAU UUGUCCUGCC       AUUCG U
  ||| ||||||||||||||||||| ||||||| |||||| ||||||||||       ||||| U
  AGA UAAAUUCAGAGAUUGCAAA UUUUAAC GAGUUA AAUAGGACGG       UAGGC A
GC   A                   A       C      C          UAAUCCC     A
Stem-loop sequence UUCUAUUUAAGUCUCUAACGUUUCAAAAUUGUCUCAAUUUUGUCCUGCCUUCAAUUCGGUUAACGGAUCCCUAAUGGCAGGAUAACAUUGAGCCAAUUUUAAAACGUUAGAGACUUAAAUAAGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR581961.1
ncRNA:24   GCAGAAUAAAUUCAGAGAUUGCAA   1
  ||||*|||||||||||||||||||
targets:184   CGUCCUAUUUAAGUCUCUAACGUU   207

0.0 TSA: Arachis hypogaea Ahy.Unigene47841 mRNA sequence NA coding protein psRNATarget
GAER01050950.1
ncRNA:24   GCAGAAUAAAUUCAGAGAUUGCAA   1
  ||||*||||||||||*||||||||
targets:533   CGUCCUAUUUAAGUCCCUAACGUU   556

1.5 TSA: Arachis hypogaea Unigene50988 mRNA sequence NA coding protein psRNATarget
GAER01050818.1
ncRNA:24   GCAGAAUAAAUUCAGAGAUUGCAA   1
  ||||*||||||||||*||||||||
targets:222   CGUCCUAUUUAAGUCCCUAACGUU   245

1.5 TSA: Arachis hypogaea Unigene50856 mRNA sequence NA coding protein psRNATarget
JR588190.1
ncRNA:24   GCAGAAUAAAUUCAGAGAUUGCAA   1
  ||||*||||||||||*||||||||
targets:110   CGUCCUAUUUAAGUCCCUAACGUU   133

1.5 TSA: Arachis hypogaea Ahy.Unigene56618 mRNA sequence NA coding protein psRNATarget
JR585401.1
ncRNA:24   GCAGAAUAAAUUCAGAGAUUGC-AA   1
  =||=*|||||||||||||||||-||
targets:57   UGUUCUAUUUAAGUCUCUAACGCUU   81

3.0 TSA: Arachis hypogaea Ahy.Unigene51500 mRNA sequence NA coding protein psRNATarget