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BaseInfo

ncRNA ID novel_ahy_miR173
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A07:14141216-14141392 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 154 - AGAGACUUAAUUACAAAAUCUGAU - 177
Stem-loop(if miRNA) --                      ----             UGCGAUAA           C          -AAAAC      ----G  UAA
  CAGAUUUUGUAAUUAAGUUUCU    AUCGUGAUAAAAA        UUAAUGGAAUA UCUGUUAAGU      GAAUAU     CU   C
  ||||||||||||||||||||||    |||||||||||||        ||||||||||| ||||||||||      ||||||     ||
  GUCUAAAACAUUAAUUCAGAGA    UAGUACUAUUUUU        AAUUGUCUUAU AGACAAUUUA      CUUAUA     GA   A
UA                      CAUA             UCAAUUUC           A          AUAUAU      AGUCA  UUC
Stem-loop sequence CAGAUUUUGUAAUUAAGUUUCUAUCGUGAUAAAAAUGCGAUAAUUAAUGGAAUACUCUGUUAAGUAAAACGAAUAUGCUUAACACUUAGACUGAAUAUUCUAUAUAAUUUAACAGAAUAUUCUGUUAACUUUAACUUUUUUAUCAUGAUAUACAGAGACUUAAUUACAAAAUCUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ738748.1
ncRNA:24   UAG---UCUAAAACAUUAAUUCAGAGA   1
  ||=---|*|||||*||||||||||*||
targets:798   AUUUUAAAAUUUUAUAAUUAAGUCCCU   824

2.5 TSA: Arachis hypogaea CL12540Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01026550.1
ncRNA:24   UAGUCUAAAACAUUAAUUCAGAGA   1
  *|==*||*|||||||||||||*||
targets:1170   UUUGCAUAUUGUAAUUAAGUCCCU   1193

2.5 TSA: Arachis hypogaea Unigene26567 mRNA sequence NA coding protein psRNATarget
JR568552.1
ncRNA:24   UAGUCUAAAACAUUAAUUCAGAGA   1
  *|==*||*|||||||||||||*||
targets:1081   UUUGCAUAUUGUAAUUAAGUCCCU   1104

2.5 TSA: Arachis hypogaea Ahy.Unigene28815 mRNA sequence NA coding protein psRNATarget