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BaseInfo

ncRNA ID novel_ahy_miR168
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A09:42739318-42739426 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UGAAGUACUGAGACAGAGACUGAG - 24
Stem-loop(if miRNA) --             ---C      UG      U    -CUC      -  G    UU
  UGAAGUACUGAGA    AGAGAC  AGAGAC GAGA    AGUAUU GU UUUG  G
  |||||||||||||    ||||||  |||||| ||||    |||||| || ||||
  ACUUUAUGACUUU    UCUCUG  UCUCUG CUUU    UCAUGG CA AGAC  G
UG             AAAA      --      U    AAAA      U  G    UU
Stem-loop sequence UGAAGUACUGAGACAGAGACUGAGAGACUGAGACUCAGUAUUGUGUUUGUUGGUUCAGAGACUGGUACUAAAAUUUCUGUCUCUGUCUCUAAAAUUUCAGUAUUUCAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01008348.1
ncRNA:24   GAGUCAGAGACAGAGUCAUGAAGU   1
  ||||||||||||||||||||*|||
targets:103   CUCAGUCUCUGUCUCAGUACCUCA   126

1.5 TSA: Arachis hypogaea Unigene8355 mRNA sequence NA coding protein psRNATarget
GAER01013891.1
ncRNA:24   GAGUCAGAGACAGAGUCAUGAAGU   1
  *|||*|||||||||||||||*|||
targets:2598   GUCAAUCUCUGUCUCAGUACCUCA   2621

1.5 TSA: Arachis hypogaea Unigene13899 mRNA sequence NA coding protein psRNATarget
EZ752467.1
ncRNA:24   GAGU--CAGAGACAGAGUCAUGAAGU   1
  ||==--||||||*||||||||||||*
targets:196   CUUGUGGUCUCUAUCUCAGUACUUCC   221

2.0 TSA: Arachis hypogaea CL3643Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01025595.1
ncRNA:24   GAGU--CAGAGACAGAGUCAUGAAGU   1
  ||==--||||||*||||||||||||*
targets:341   CUUGUGGUCUCUAUCUCAGUACUUCC   366

2.0 TSA: Arachis hypogaea Unigene25612 mRNA sequence NA coding protein psRNATarget