Search result

BaseInfo

ncRNA ID novel_ahy_miR165
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:11343750-11343853 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AGGACUAAAUUGGAUACAAAUACA - 24
Stem-loop(if miRNA) --                    U  GAAA    AA   --U   -A     UAUCU
  UAUUUGUAUCUAAUUUAGUU CU    CCCU  UUA   CUU  UUAUU     G
  |||||||||||||||||||| ||    ||||  |||   |||  |||||
  AUAAACAUAGGUUAAAUCAG GA    GGGA  AAU   GAA  AGUAA     A
AC                    -  ----    AC   UUU   AC     UAUUG
Stem-loop sequence UAUUUGUAUCUAAUUUAGUUUCUGAAACCCUAAUUAUCUUAUUAUUUAUCUGAGUUAUAAUGACAAAGUUUUAACAAGGGAGGACUAAAUUGGAUACAAAUACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01047534.1
ncRNA:24   ACAUAAACAUAGGUUAAAUCAGGA   1
  ||||||||||||||||||||||||
targets:39   UGUAUUUGUAUCCAAUUUAGUCCU   62

0.0 TSA: Arachis hypogaea Unigene47570 mRNA sequence NA coding protein psRNATarget
JR556400.1
ncRNA:24   ACAUAAACAUAGGUUAAAUCAGGA   1
  ||||||||||||||||||||||||
targets:3   UGUAUUUGUAUCCAAUUUAGUCCU   26

0.0 TSA: Arachis hypogaea Ahy.Unigene16212 mRNA sequence NA coding protein psRNATarget