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BaseInfo

ncRNA ID novel_ahy_miR159
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A07:57202106-57202274 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AGUUAAUUAGGACUACUAGGUAUG - 24
Stem-loop(if miRNA) --C      G                         A A     A                 AA  U      U    GAAC UG G
   ACUUAG AGUCUUAAUUAACUAUUAACAUAAU A UUUAU AAAUUAGAUUAAAUUAA  CC AAUUGA GGGA    U  A G
   |||||| ||||||||||||||||||||||||| | ||||| |||||||||||||||||  || |||||| ||||    |  |
   UGGAUC UCAGGAUUAAUUGAUAAUUGUAUUA U AAAUA UUUAAUCUAGUUUAAUU  GG UUAACU CUCU    G  U U
GUA      A                         A C     C                 GA  U      -    --AA GU A
Stem-loop sequence CACUUAGGAGUCUUAAUUAACUAUUAACAUAAUAAAUUUAUAAAAUUAGAUUAAAUUAAAACCUAAUUGAUGGGAGAACUUGAGGUAUUGGAAUCUCUCAAUUUGGAGUUAAUUUGAUCUAAUUUCAUAAACUAAUUAUGUUAAUAGUUAAUUAGGACUACUAGGUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ745528.1
ncRNA:24   GUAUGGAUCAUCAGGAUUAAUUGA   1
  ||||||||||||||||||||||||
targets:906   CAUACCUAGUAGUCCUAAUUAACU   929

0.0 TSA: Arachis hypogaea CL7423Contig1.Arhy mRNA sequence NA coding protein psRNATarget