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BaseInfo

ncRNA ID novel_ahy_miR156
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A07:7393636-7393845 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AUUAACUGAUAGCAUACAUGACAC - 24
Stem-loop(if miRNA) --     C          C    C  AUAAC            A              A    CG     C   C          --C  GAUCAUAUUGGGAAUA
  AUUAA UGAUAGCAUA AUGA AC     AUGUUUAAUUAG UGUUGAUUAAAUAU UUUA  AAAAU UAU AAUUUAGUCA   UA                G
  ||||| |||||||||| |||| ||     |||||||||||| |||||||||||||| ||||  ||||| ||| ||||||||||   ||
  UAAUU ACUAUUGUAU UAUU UG     UACAGAUUAAUC AUAACUAAUUUAUA AAAU  UUUUA AUA UUAAAUUAGU   AA                G
UG     A          A    A  GAAUA            A              C    AU     A   A          AAA  AAGGUUAAUAUGUUUA
Stem-loop sequence AUUAACUGAUAGCAUACAUGACACAUAACAUGUUUAAUUAGAUGUUGAUUAAAUAUAUUUACGAAAAUCUAUCAAUUUAGUCACUAGAUCAUAUUGGGAAUAGGAUUUGUAUAAUUGGAAAAAAAUGAUUAAAUUAAUAAAUUUUUAUAAACAUAUUUAAUCAAUAACUAAUUAGACAUAUAAGGUAUUAUAUAUGUUAUCAAUUAAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  ||||||||||||||||||||||||
targets:725   GUGUCAUGUAUGCUAUCAGUUAAU   748

0.0 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ735986.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  *|||=*|*|||||||||||||||*
targets:18   UUGUUUUAUAUGCUAUCAGUUAAA   41

3.0 TSA: Arachis hypogaea CL1Contig15002.Arhy mRNA sequence NA coding protein psRNATarget
GAER01049126.1
ncRNA:24   CACAGUACAUACGAUAGUCAAUUA   1
  *|||=*|*|||||||||||||||*
targets:47   UUGUUUUAUAUGCUAUCAGUUAAA   70

3.0 TSA: Arachis hypogaea Unigene49163 mRNA sequence NA coding protein psRNATarget