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BaseInfo

ncRNA ID	ath-miRf10332-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - ACUCGACCUGGGGGUCGAGU - NA
Stem-loop(if miRNA)	--           G           -   --G UG -AG   UG UGUCUU          A AUGUAGA  CACUCGACCUC GGGUCGAGUGG UGA   G  A   UGG  G      CUACUCGACC G |||||||  ||||||||||| ||||||||||| |||   |  |   |||  |      |||||||||| UACGUUU  GUGAGCUGGGG UCCAGCUCAUC GCU   U  U   GUC  C      GGUGAGCUGG G        UG           G           U   AAG GU GGA   GU -----U          G
Stem-loop sequence	AUGUAGACACUCGACCUCGGGGUCGAGUGGUGAGGUGAAGUGGUGGUGUCUUCUACUCGACCAGGGGGUCGAGUGGUCUGCUGAGGUUGUGAAUCGUCUACUCGACCUGGGGGUCGAGUGGUUUUGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT025674.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||||||||||| targets:189   ACUCGACCCCCAGGUCGAGU   208 Target Full Sequence	0.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||||||||||| targets:138   ACUCGACCCCCAGGUCGAGU   157 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||||||||||| targets:138   ACUCGACCCCCAGGUCGAGU   157 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||||||||||| targets:1106   ACUCGACCCCCAGGUCGAGU   1125 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT025674.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:310   ACUCGACCCCCUGGUCGAGU   329 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:183   ACUCGACCCCCUGGUCGAGU   202 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:232   ACUCGACCCCCUGGUCGAGU   251 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:183   ACUCGACCCCCUGGUCGAGU   202 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:232   ACUCGACCCCCUGGUCGAGU   251 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:92   ACUCGACCCCCUGGUCGAGU   111 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   ||||||||*||||||||||| targets:451   ACUCGACCACCAGGUCGAGU   470 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:126   ACUCGACCCCCUGGUCGAGU   145 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   ||||||||||*||||||||| targets:856   ACUCGACCCCGAGGUCGAGU   875 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183193.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:501   ACUCGACCCCCUGGUCGAGU   520 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:501   ACUCGACCCCCUGGUCGAGU   520 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   |||||||||||*|||||||| targets:1573   ACUCGACCCCCUGGUCGAGU   1592 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   ||||||||||*||||||||| targets:1619   ACUCGACCCCGAGGUCGAGU   1638 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   ||||*||||||*|||||||| targets:303   ACUCAACCCCCUGGUCGAGU   322 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   ||||*||||||*|||||||| targets:303   ACUCAACCCCCUGGUCGAGU   322 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:20   UGAGCUGGGGGUCCAGCUCA   1   ||*||||||||*|||||||| targets:585   ACYCGACCCCCUGGUCGAGU   604 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget