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BaseInfo

ncRNA ID novel_ahy_miR152
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:55901501-55901683 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UGGACCAUUCUGAAAGCAUGUCAG - 24
Stem-loop(if miRNA) --             A           U     C       U  GU       -  -   UC     CUUCAU  A   -    --      UCU
  UGGACCAUUCUGA AGCAUGUCAGG GGACA CUCCUGA CA  UGCUUGU AU CUU  CCAAG      AG GGG GUUC  ACCUUC   U
  ||||||||||||| ||||||||||| ||||| ||||||| ||  ||||||| || |||  |||||      || ||| ||||  ||||||   U
  ACCUGGUAAGACU UCGUACAGUCC CCUGU GAGGACU GU  GCGGAUA UA GGG  GGUUC      UC CCU CAAG  UGGAAG   G
CU             C           U     A       C  --       C  C   UU     -UAAUU  A   U    UU      UCU
Stem-loop sequence UGGACCAUUCUGAAAGCAUGUCAGGUGGACACCUCCUGAUCAGUUGCUUGUAUCUUUCCCAAGCUUCAUAGAGGGGUUCACCUUCUCUUUGUCUGAAGGUUUGAACUUCCACUUUAAUCUUGGUUGGGCAUCAUAGGCGUGCUCAGGAGAUGUCCUCCUGACAUGCUCUCAGAAUGGUCCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ744636.1
ncRNA:24   GACUGUACGAAAGUCUUACCAGGU   1
  |*||*|*|=||||||||||||||*
targets:177   CGGAGAGGUUUUCAGAAUGGUCCU   200

3.0 TSA: Arachis hypogaea CL2920Contig2.Arhy mRNA sequence NA coding protein psRNATarget
JR564251.1
ncRNA:24   GACUGUACGAAAGUCUUACCAGGU   1
  |*||*|*|=||||||||||||||*
targets:48   CGGAGAGGUUUUCAGAAUGGUCCU   71

3.0 TSA: Arachis hypogaea Ahy.Unigene24350 mRNA sequence NA coding protein psRNATarget