ncRNA ID | novel_ahy_miR152 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A06:55901501-55901683 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGGACCAUUCUGAAAGCAUGUCAG - 24 |
Stem-loop(if miRNA) |
--             A           U     C       U  GU       -  -   UC     CUUCAU  A   -    --      UCU   UGGACCAUUCUGA AGCAUGUCAGG GGACA CUCCUGA CA  UGCUUGU AU CUU  CCAAG      AG GGG GUUC  ACCUUC   U   ||||||||||||| ||||||||||| ||||| ||||||| ||  ||||||| || |||  |||||      || ||| ||||  ||||||   U   ACCUGGUAAGACU UCGUACAGUCC CCUGU GAGGACU GU  GCGGAUA UA GGG  GGUUC      UC CCU CAAG  UGGAAG   G CU             C           U     A       C  --       C  C   UU     -UAAUU  A   U    UU      UCU |
Stem-loop sequence | UGGACCAUUCUGAAAGCAUGUCAGGUGGACACCUCCUGAUCAGUUGCUUGUAUCUUUCCCAAGCUUCAUAGAGGGGUUCACCUUCUCUUUGUCUGAAGGUUUGAACUUCCACUUUAAUCUUGGUUGGGCAUCAUAGGCGUGCUCAGGAGAUGUCCUCCUGACAUGCUCUCAGAAUGGUCCAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ744636.1 |
|
3.0 | TSA: Arachis hypogaea CL2920Contig2.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR564251.1 |
|
3.0 | TSA: Arachis hypogaea Ahy.Unigene24350 mRNA sequence | NA | coding protein | psRNATarget |