Search result

BaseInfo

ncRNA ID novel_ahy_miR149
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:3812625-3812714 [-]
Reference genome Aradu_v1.0
Source SRR1323745;SRR2922380;SRR2922381
Length 22
Mature sequence(if miRNA) 69 - UAAAGCUGCCAGCAUGAUCUGA - 90
Stem-loop(if miRNA) --UA     G   G          A   A     UUCCUUCUUCC
    AAGCU CCA CAUGAUCUGA CUU UUACC           U
    ||||| ||| |||||||||| ||| |||||           U
    UUCGA GGU GUACUAGACU GAA GGUGG           A
CUAC     G   -          A   C     UGUGUGUUUAU
Stem-loop sequence UAAAGCUGCCAGCAUGAUCUGAACUUAUUACCUUCCUUCUUCCUUAUAUUUGUGUGUGGUGGCAAGAUCAGAUCAUGUGGGAGCUUCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR555230.1
ncRNA:22   AGUCUAGUACGACCGUCGAAAU   1
  |*||||||||||||||||||*|
targets:213   UAAGAUCAUGCUGGCAGCUUCA   234

1.5 TSA: Arachis hypogaea Ahy.Unigene15023 mRNA sequence NA coding protein psRNATarget
GAER01017135.1
ncRNA:22   AGUCUAGUACGACCGUCGAAAU   1
  |*||||||||||||||||||*|
targets:232   UAAGAUCAUGCUGGCAGCUUCA   253

1.5 TSA: Arachis hypogaea Unigene17143 mRNA sequence NA coding protein psRNATarget
GAER01005557.1
ncRNA:22   AGUCUAGUACGACCGUCGAAAU   1
  |*||||||||||||||||||*|
targets:318   UAAGAUCAUGCUGGCAGCUUCA   339

1.5 TSA: Arachis hypogaea Unigene5562 mRNA sequence NA coding protein psRNATarget