Search result

BaseInfo

ncRNA ID novel_ahy_miR148
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:5123717-5123794 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 58 - UGGAGAAGCAGGGCACGUGCA - 78
Stem-loop(if miRNA) --        C            -AACAU      -  CU
  UGGAGAAG AGGGCACGUGCA      CUCUAU AG  U
  |||||||| ||||||||||||      |||||| ||
  ACCUCUUC UCUUGUGCACGU      GGGGUG UC  U
CA        C            CAAUCU      G  UC
Stem-loop sequence UGGAGAAGCAGGGCACGUGCAAACAUCUCUAUAGCUUUCUCUGGUGGGGUCUAACUGCACGUGUUCUCCUUCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000860.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  |||||||||||||||||||||
targets:89   UGCACGUGCCCUGCUUCUCCA   109

0.0 TSA: Arachis hypogaea Unigene861 mRNA sequence NA coding protein psRNATarget
EZ741099.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:729   CUUACGUGCCCUGCUUCUCCA   749

1.0 TSA: Arachis hypogaea CL4114Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01018285.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:243   CUUACGUGCCCUGCUUCUCCA   263

1.0 TSA: Arachis hypogaea Unigene18293 mRNA sequence NA coding protein psRNATarget
GAER01018302.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:570   CUUACGUGCCCUGCUUCUCCA   590

1.0 TSA: Arachis hypogaea Unigene18310 mRNA sequence NA coding protein psRNATarget
GAER01018287.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:553   CUUACGUGCCCUGCUUCUCCA   573

1.0 TSA: Arachis hypogaea Unigene18295 mRNA sequence NA coding protein psRNATarget
GAER01018306.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:769   CUUACGUGCCCUGCUUCUCCA   789

1.0 TSA: Arachis hypogaea Unigene18314 mRNA sequence NA coding protein psRNATarget
EZ722985.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  *|||*||||||||||||||||
targets:776   AGCAAGUGCCCUGCUUCUCCA   796

1.0 TSA: Arachis hypogaea CL1Contig2001.Arhy mRNA sequence NA coding protein psRNATarget
GAER01033688.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  *|||*||||||||||||||||
targets:769   AGCAAGUGCCCUGCUUCUCCA   789

1.0 TSA: Arachis hypogaea Unigene33710 mRNA sequence NA coding protein psRNATarget
GAER01015257.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **|||*||||||*||||||||
targets:206   CACACCUGCCCUUCUUCUCCA   226

2.5 TSA: Arachis hypogaea Unigene15265 mRNA sequence NA coding protein psRNATarget