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BaseInfo

ncRNA ID novel_ahy_miR147
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:11309653-11309767 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 92 - ACAAAAAUGUUGGAAUUAACGGAA - 115
Stem-loop(if miRNA) --      AU                     C   A   -AAAAC      ---   UAA
  ACAAAA  GUUGGAAUUAACGGAAUAUUC AUU AAC      GAAUAU   GUC   C
  ||||||  ||||||||||||||||||||| ||| |||      ||||||   |||
  UGUUUU  CAAUUUUAAUUGCCUUAUAAG UAA UUG      CUUAUA   CAG   A
AC      -C                     A   A   AUAUAU      AGU   UUA
Stem-loop sequence ACAAAAAUGUUGGAAUUAACGGAAUAUUCCAUUAAACAAAACGAAUAUGUCUAACAAUUGACUGAAUAUUCUAUAUAGUUAAAUAGAAUAUUCCGUUAAUUUUAACCUUUUGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR552884.1
ncRNA:24   AAGGCAAUUAAGGUUGUAAAAACA   1
  *****|||||||||||||||||||
targets:1048   GAGGUUUAAUUCCAACAUUUUUGU   1071

0.0 TSA: Arachis hypogaea Ahy.Unigene12585 mRNA sequence NA coding protein psRNATarget
JR541992.1
ncRNA:24   AAGGCAAUUAAGGUUGUAAAAACA   1
  *||=|*|*||||||||||||||||
targets:202   AUCUGAUCAUUCCAACAUUUUUGU   225

2.0 TSA: Arachis hypogaea Ahy.Unigene1321 mRNA sequence NA coding protein psRNATarget
GAER01057852.1
ncRNA:24   AAGGCAAUUAAGGUUGUAAAAACA   1
  |||=-|||*|||||||||*|||||
targets:98   UUCU-UUAUUUCCAACAUAUUUGU   120

2.5 TSA: Arachis hypogaea Unigene57898 mRNA sequence NA coding protein psRNATarget
JR564236.1
ncRNA:24   AAGGCAAUUAAGGUUGUAAAAACA   1
  *|==||||=|*||||||||||||*
targets:1023   CUUUGUUAGUACCAACAUUUUUGG   1046

3.0 TSA: Arachis hypogaea Ahy.Unigene24334 mRNA sequence NA coding protein psRNATarget