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BaseInfo

ncRNA ID ath-miRf10331-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GGUGUCGAUCGACACUGGUU - NA
Stem-loop(if miRNA)             -A    UA            CUCG    G AG     U
GAUCGACACUAG  GGUG  UCGAUCGACACC    UGAG A  UGUUU U
||||||||||||  ||||  ||||||||||||    |||| |  |||||
CUGGCUGUGGUU  UCAC  AGCUAGCUGUGG    GCUU U  AUAAA G
            GG    --            CAUA    G -A     A
Stem-loop sequence GAUCGACACUAGAGGUGUAUCGAUCGACACCCUCGUGAGGAAGUGUUUUUGAAAAUAAUGUUCGAUACGGUGUCGAUCGACACUGGUUGGUGUCGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183308.1
ncRNA:20   UUGGUC--ACAGCUAGCUGUGG   1
  =|||||--||||||||||||||
targets:1236   GACCAGAGUGUCGAUCGACACC   1257

2.5 Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence NA coding protein psRNATarget
EF183309.1
ncRNA:20   UUGGUC--ACAGCUAGCUGUGG   1
  =|||||--||||||||||||||
targets:1328   GACCAGAGUGUCGAUCGACACC   1349

2.5 Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence NA coding protein psRNATarget
AY219108.1
ncRNA:20   UUGGUCACAGCUAGCUGUGG   1
  **|==|||||||||||||||
targets:397   UCCUGGUGUCGAUCGACACC   416

3.0 Arabidopsis thaliana hypothetical protein (At2g06095/F5K7.25) mRNA, complete cds NA coding protein psRNATarget
NM_147252.2
ncRNA:20   UUGGUCACAGCUAGCUGUGG   1
  **|==|||||||||||||||
targets:435   UCCUGGUGUCGAUCGACACC   454

3.0 Arabidopsis thaliana transmembrane protein mRNA transmembrane protein(AT2G06095) coding protein psRNATarget