ncRNA ID | ath-miRf10331-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GGUGUCGAUCGACACUGGUU - NA |
Stem-loop(if miRNA) |
            -A    UA            CUCG    G AG     U GAUCGACACUAG  GGUG  UCGAUCGACACC    UGAG A  UGUUU U ||||||||||||  ||||  ||||||||||||    |||| |  ||||| CUGGCUGUGGUU  UCAC  AGCUAGCUGUGG    GCUU U  AUAAA G             GG    --            CAUA    G -A     A |
Stem-loop sequence | GAUCGACACUAGAGGUGUAUCGAUCGACACCCUCGUGAGGAAGUGUUUUUGAAAAUAAUGUUCGAUACGGUGUCGAUCGACACUGGUUGGUGUCGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183308.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183309.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY219108.1 |
|
3.0 | Arabidopsis thaliana hypothetical protein (At2g06095/F5K7.25) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_147252.2 |
|
3.0 | Arabidopsis thaliana transmembrane protein mRNA | transmembrane protein(AT2G06095) | coding protein | psRNATarget |