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BaseInfo

ncRNA ID novel_ahy_miR141
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:12843541-12843623 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 60 - CUGAAAUUUUAGGGACAGAGACAG - 83
Stem-loop(if miRNA) --        UU      AUA     -CCCCU  GU -  UAC
  GUCUCUGU  CUAAAA   UCAGU      GU  C CC   A
  ||||||||  ||||||   |||||      ||  | ||
  CAGAGACA  GAUUUU   AGUCA      CA  G GG   U
GA        GG      -AA     UAAAGU  UG A  UUU
Stem-loop sequence GUCUCUGUUUCUAAAAAUAUCAGUCCCCUGUGUCCCUACAUUUUGGAGGUACUGAAAUACUGAAAUUUUAGGGACAGAGACAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ728221.1
ncRNA:24   GACAGAGACAGGGAUUUUAAAGUC   1
  |||||||||||=||||||||||||
targets:231   CUGUCUCUGUCUCUAAAAUUUCAG   254

1.5 TSA: Arachis hypogaea CL1Contig7237.Arhy mRNA sequence NA coding protein psRNATarget
JR573198.1
ncRNA:24   GACAGAGACAGGGAUUUUAAAGUC   1
  |*||||*||||=||||||||||||
targets:163   CAGUCUAUGUCUCUAAAAUUUCAG   186

2.5 TSA: Arachis hypogaea Ahy.Unigene35840 mRNA sequence NA coding protein psRNATarget
GAER01022094.1
ncRNA:24   GACAGAGACAGGGAUUUUAAAGUC   1
  |*||||*||||=||||||||||||
targets:346   CAGUCUAUGUCUCUAAAAUUUCAG   369

2.5 TSA: Arachis hypogaea Unigene22105 mRNA sequence NA coding protein psRNATarget