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BaseInfo

ncRNA ID novel_ahy_miR140
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:60839755-60839884 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - CGUUAGGGACUUAAAUAAGACGAA - 24
Stem-loop(if miRNA) --    C   A                     C  A      C         CA    GGA    U
  CGUC UAU UAAGUCCCUAACGUUUCAAAA UG CUCAAU UUGUCCUGC  UUAG   UCUG U
  |||| ||| ||||||||||||||||||||| || |||||| |||||||||  ||||   ||||
  GCAG AUA AUUCAGGGAUUGCAAAGUUUU GC GAGUUA AACAGGGCG  AGUU   AGAC A
AA    A   A                     A  A      A         AC    --A    A
Stem-loop sequence CGUCCUAUAUAAGUCCCUAACGUUUCAAAACUGACUCAAUCUUGUCCUGCCAUUAGGGAUCUGUUAACAGAAUUGACAGCGGGACAAAAUUGAGACGAUUUUGAAACGUUAGGGACUUAAAUAAGACGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01050950.1
ncRNA:24   AAGCAGAAUAAAUUCAGGGAUUGC   1
  *|||||*|||||||||||||||||
targets:531   AUCGUCCUAUUUAAGUCCCUAACG   554

1.0 TSA: Arachis hypogaea Unigene50988 mRNA sequence NA coding protein psRNATarget
GAER01050818.1
ncRNA:24   AAGCAGAAUAAAUUCAGGGAUUGC   1
  *|||||*|||||||||||||||||
targets:220   AUCGUCCUAUUUAAGUCCCUAACG   243

1.0 TSA: Arachis hypogaea Unigene50856 mRNA sequence NA coding protein psRNATarget
JR588190.1
ncRNA:24   AAGCAGAAUAAAUUCAGGGAUUGC   1
  *|||||*|||||||||||||||||
targets:108   AUCGUCCUAUUUAAGUCCCUAACG   131

1.0 TSA: Arachis hypogaea Ahy.Unigene56618 mRNA sequence NA coding protein psRNATarget
JR581961.1
ncRNA:24   AAGCAGAAUAAAUUCAGGGAUUGC   1
  *|||||*||||||||||=||||||
targets:182   AUCGUCCUAUUUAAGUCUCUAACG   205

2.5 TSA: Arachis hypogaea Ahy.Unigene47841 mRNA sequence NA coding protein psRNATarget
GAER01025961.1
ncRNA:21   CAGAAUAAAUUCAGGGAUUGC   1
  |||*|||||||||=|||||||
targets:1   GUCCUAUUUAAGUUCCUAACG   21

2.5 TSA: Arachis hypogaea Unigene25978 mRNA sequence NA coding protein psRNATarget
GAER01000641.1
ncRNA:21   CAGAAUAAAUUCAGGGAUUGC   1
  |||*|||||||||=|||||||
targets:1   GUCCUAUUUAAGUUCCUAACG   21

2.5 TSA: Arachis hypogaea Unigene641 mRNA sequence NA coding protein psRNATarget