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BaseInfo

ncRNA ID novel_ahy_miR138
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A06:63345779-63345933 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AGGACAAAAAGUAUACUUUACCCU - 24
Stem-loop(if miRNA) --           A         C         AC                          UCAAAAAA     AC    C
  GGUAAAGUAUA UUUUUGUUC UGAAGUUUG  AAAAGUUUCAAAAAUACUCUUAAGUU        AGUAU  UUUA C
  ||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||        |||||  ||||
  CCAUUUCAUAU AAAAACAGG ACUUCAAAC  UUUUCAAAGUUUUUAUGGGGAUUCAA        UCAUA  AAAU C
UC           G         A         CU                          -----UCC     --    U
Stem-loop sequence GGUAAAGUAUAAUUUUUGUUCCUGAAGUUUGACAAAAGUUUCAAAAAUACUCUUAAGUUUCAAAAAAAGUAUACUUUACCCUUAAAAUACUCCUAACUUAGGGGUAUUUUUGAAACUUUUUCCAAACUUCAAGGACAAAAAGUAUACUUUACCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01005228.1
ncRNA:24   UCCCAUUUCAUAUGAAAAACAGGA   1
  |||||||||||||=||||||||||
targets:154   AGGGUAAAGUAUAUUUUUUGUCCU   177

1.5 TSA: Arachis hypogaea Unigene5233 mRNA sequence NA coding protein psRNATarget
GAER01023797.1
ncRNA:24   UCCCAUUUCAUAUGAAAAACAGGA   1
  |||*|||||||||=||||||||||
targets:1160   AGGAUAAAGUAUAUUUUUUGUCCU   1183

1.5 TSA: Arachis hypogaea Unigene23808 mRNA sequence NA coding protein psRNATarget
GAER01023796.1
ncRNA:24   UCCCAUUUCAUAUGAAAAACAGGA   1
  |||*|||||||||=||||||||||
targets:1194   AGGAUAAAGUAUAUUUUUUGUCCU   1217

1.5 TSA: Arachis hypogaea Unigene23807 mRNA sequence NA coding protein psRNATarget
GAER01023795.1
ncRNA:24   UCCCAUUUCAUAUGAAAAACAGGA   1
  |||*|||||||||=||||||||||
targets:1341   AGGAUAAAGUAUAUUUUUUGUCCU   1364

1.5 TSA: Arachis hypogaea Unigene23806 mRNA sequence NA coding protein psRNATarget