Search result

BaseInfo

ncRNA ID	novel_ahy_miR133
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A06:99849265-99849316 [-]
Reference genome	Aradu_v1.0
Source	SRR1323745
Length	24
Mature sequence(if miRNA)	1 - AGGUAGAAACUCAGGUGCAGUCGA - 24
Stem-loop(if miRNA)	--A         A     UC   AUA    ACUGCACCU AGUUU  ACC   C    ||||||||| |||||  |||    UGACGUGGA UCAAA  UGG   A AGC         C     GA   AUU
Stem-loop sequence	AACUGCACCUAAGUUUUCACCAUACAUUAGGUAGAAACUCAGGUGCAGUCGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01053760.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   *|*||||||||||||||||||||| targets:130   CCAACUGCACCUGAGUUUCUACCU   153 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene53800 mRNA sequence	NA	coding protein	psRNATarget
GAER01020058.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   |*||*||||||||||||||||||| targets:2298   UAGAAUGCACCUGAGUUUCUACCU   2321 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene20067 mRNA sequence	NA	coding protein	psRNATarget
GAER01057592.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   |=*|||||||=||||||||||||| targets:176   UUAACUGCACUUGAGUUUCUACCU   199 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene57638 mRNA sequence	NA	coding protein	psRNATarget
JR580642.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   |=*=||||||=||||||||||||| targets:184   UUAGCUGCACUUGAGUUUCUACCU   207 Target Full Sequence	1.0	TSA: Arachis hypogaea Ahy.Unigene46522 mRNA sequence	NA	coding protein	psRNATarget
JR570363.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   ||||*||||||||||||||*|||| targets:160   UCGAAUGCACCUGAGUUUCCACCU   183 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene30687 mRNA sequence	NA	coding protein	psRNATarget
EZ747471.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   *||-|||||||||||||||*|||| targets:613   ACG-CUGCACCUGAGUUUCAACCU   635 Target Full Sequence	1.5	TSA: Arachis hypogaea CL20093Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01044862.1	ncRNA:19   ACGUGGACUCAAAGAUGGA   1   ||||||||||||||*|||| targets:1   UGCACCUGAGUUUCCACCU   19 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene44896 mRNA sequence	NA	coding protein	psRNATarget
JR546132.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   ||||||||||=||||||||||*|| targets:149   UCGACUGCACUUGAGUUUCUAGCU   172 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene5573 mRNA sequence	NA	coding protein	psRNATarget
JR559052.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   |||||||||||||||||||*|||* targets:80   UCGACUGCACCUGAGUUUCCACCA   103 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene18963 mRNA sequence	NA	coding protein	psRNATarget
GAER01005312.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   *=|||||=|||||||||||*|||| targets:15   AUGACUGUACCUGAGUUUCCACCU   38 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene5317 mRNA sequence	NA	coding protein	psRNATarget
EZ752265.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   ||*|||||||=|||*||||||||| targets:853   UCAACUGCACUUGAAUUUCUACCU   876 Target Full Sequence	2.5	TSA: Arachis hypogaea CL2787Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01013535.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   |=*|||||||=|||*||||||||| targets:78   UUAACUGCACUUGAAUUUCUACCU   101 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene13543 mRNA sequence	NA	coding protein	psRNATarget
EZ721080.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   *|*|||||||*|||||||=||||| targets:496   ACAACUGCACGUGAGUUUUUACCU   519 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1Contig96.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01034339.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   *|*|||||||*|||||||=||||| targets:493   ACAACUGCACGUGAGUUUUUACCU   516 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene34362 mRNA sequence	NA	coding protein	psRNATarget
JR571563.1	ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1   |=|*||*||=*||||||||||||| targets:407   UUGUCUUCAUGUGAGUUUCUACCU   430 Target Full Sequence	3.0	TSA: Arachis hypogaea Ahy.Unigene32964 mRNA sequence	NA	coding protein	psRNATarget